Sodium in PDB, part 137 (files: 5441-5480),
PDB 5b15-5bph
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 5441-5480 (PDB 5b15-5bph).
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5b15 (Na: 7) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to Hydrolyzed Doripenem
Other atoms:
Zn (2);
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5b1a (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State at 1.5 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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5b1b (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Fully Reduced State at 1.6 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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5b1f (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme
Other atoms:
Cl (1);
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5b1g (Na: 1) - Crystal Structure of Hen Egg-White Lysozyme
Other atoms:
Cl (1);
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5b1u (Na: 15) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to Hydrolyzed Imipenem
Other atoms:
Zn (2);
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5b2o (Na: 4) - Crystal Structure of Francisella Novicida CAS9 in Complex with Sgrna and Target Dna (Tgg Pam)
Other atoms:
Zn (1);
Ca (17);
Cl (2);
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5b2p (Na: 4) - Crystal Structure of Francisella Novicida CAS9 in Complex with Sgrna and Target Dna (Tga Pam)
Other atoms:
Zn (1);
Ca (17);
Cl (2);
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5b2q (Na: 4) - Crystal Structure of Francisella Novicida CAS9 Rha in Complex with Sgrna and Target Dna (Tgg Pam)
Other atoms:
Zn (1);
Ca (17);
Cl (2);
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5b30 (Na: 1) - H-Ras Wt in Complex with Gppnhp (State 1) After Structural Transition By Humidity Control
Other atoms:
Mg (1);
Ca (2);
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5b3j (Na: 1) - Activation of Nmda Receptors and the Mechanism of Inhibition By Ifenprodil
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5b3s (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Carbon Monoxide-Bound Mixed- Valence State at 1.68 Angstrom Resolution (50 K)
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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5b43 (Na: 1) - Crystal Structure of Acidaminococcus Sp. CPF1 in Complex with Crrna and Target Dna
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5b4t (Na: 1) - Crystal Structure of D-3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Complexed with Nad+ and A Substrate D-3- Hydroxybutyrate
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5b4u (Na: 1) - Crystal Structure of D-3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Complexed with Nad+ and An Inhibitor Malonate
Other atoms:
Cl (1);
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5b4v (Na: 3) - Crystal Structure of D-3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Complexed with Nad+ and An Inhibitor Methylmalonate
Other atoms:
Cl (1);
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5b5h (Na: 2) - Hydrophobic Ice-Binding Site Confer Hyperactivity on Antifreeze Protein From A Snow Mold Fungus
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5b5j (Na: 2) - Hen Egg White Lysozyme with Boron Tracedrug Utx-97
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5b5o (Na: 2) - Crystal Structure of the Catalytic Domain of Mmp-13 Complexed with N- Phenyl-4-((4H-1,2,4-Triazol-3-Ylsulfanyl)Methyl)-1,3-Thiazol-2-Amine
Other atoms:
Ca (4);
Zn (4);
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5b6h (Na: 2) - Crystal Structure of An Aprt From Yersinia Pseudotuberculosis in Complex with Amp.
Other atoms:
Cl (1);
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5b6l (Na: 1) - Structure of Deg Protease Hhoa From Synechocystis Sp. Pcc 6803
Other atoms:
Zn (1);
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5b8d (Na: 1) - Crystal Structure of A Low Occupancy Fragment Candidate (N-(4-Methyl- 1,3-Thiazol-2-Yl)Propanamide) Bound Adjacent to the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
Other atoms:
Zn (3);
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5bju (Na: 2) - X-Ray Structure of the Pglf Dehydratase From Campylobacter Jejuni in Complex with Udp and Nad(H)
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5bjv (Na: 4) - X-Ray Structure of the Pglf Udp-N-Acetylglucosamine 4,6-Dehydratase From Campylobacterjejuni, D396N/K397A Variant in Complex with Udp-N- Acrtylglucosamine
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5bjw (Na: 4) - X-Ray Structure of the Pglf 4,6-Dehydratase From Campylobacter Jejuni, T595S Variant, in Complex with Udp
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5bjx (Na: 8) - X-Ray Structure of the Pglf 4,6-Dehydratase From Campylobacter Jejuni, Variant T395V, in Complex with Udp
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5bjy (Na: 6) - X-Ray Structure of the Pglf 4,5-Dehydratase From Campylobacter Jejuni, Variant M405Y, in Complex with Udp
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5bmw (Na: 2) - Crystal Structure of T75V Mutant of Triosephosphate Isomerase From Plasmodium Falciparum
Other atoms:
Ca (1);
-
5bmx (Na: 4) - Crystal Structure of T75N Mutant of Triosephosphate Isomerase From Plasmodium Falciparum
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5bn8 (Na: 1) - Crystal Structure of Nucleotide-Free Human HSP70 Nbd.
Other atoms:
Mg (2);
Cl (1);
-
5bn9 (Na: 1) - Crystal Structure of Adp Bound Human HSP70 Nbd Mutant R272K.
Other atoms:
Cl (1);
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5bnh (Na: 2) - Crystal Structure of the Hltf Hiran Domain with A Ssdna Fragment
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5bnk (Na: 2) - Crystal Structure of T75C Mutant of Triosephosphate Isomerase From Plasmodium Falciparum
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5bnq (Na: 1) - Crystal Structure of Hrankl-Mrank Complex
Other atoms:
Cl (8);
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5boj (Na: 1) - Crystal Structure of Human Transthyretin in Complex with Gemfibrozil
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5bol (Na: 1) - Dna Polymerase Beta Ternary Complex with A Templating 5CLC and Incoming Dgtp Analog
Other atoms:
Mg (2);
Cl (1);
-
5bom (Na: 3) - Dna Polymerase Beta Binary Complex with A Templating 5CLC
Other atoms:
Cl (1);
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5bpc (Na: 1) - Dna Polymerase Beta Ternary Complex with A Templating 5CLC and Incoming Datp Analog
Other atoms:
Mn (4);
Cl (1);
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5bpf (Na: 5) - Crystal Structure of Adp Complexed D-Alanine-D-Alanine Ligase(Ddl) From Yersinia Pestis
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5bph (Na: 5) - Crystal Structure of Amp Complexed D-Alanine-D-Alanine Ligase(Ddl) From Yersinia Pestis
Page generated: Thu Dec 28 11:21:40 2023
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