Atomistry » Sodium » PDB 4u9g-4us4
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Sodium in PDB, part 126 (files: 5001-5040), PDB 4u9g-4us4

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 5001-5040 (PDB 4u9g-4us4).
  1. 4u9g (Na: 1) - Crystal Structure of An H-Nox Protein From S. Oneidensis in the Fe(II)Co Ligation State, Q154A/Q155A/K156A Mutant
    Other atoms: Zn (2); Fe (2);
  2. 4u9j (Na: 1) - Crystal Structure of An H-Nox Protein From S. Oneidensis in the Mn(II) Ligation State, Q154A/Q155A/K156A Mutant
    Other atoms: Mn (2); Zn (2);
  3. 4u9k (Na: 1) - Crystal Structure of An H-Nox Protein From S. Oneidensis in the Mn(II)No Ligation State, Q154A/Q155A/K156A Mutant
    Other atoms: Mn (2); Zn (2);
  4. 4u9u (Na: 2) - Crystal Structure of Nqrf Fad-Binding Domain From Vibrio Cholerae
    Other atoms: Mg (2);
  5. 4u9w (Na: 4) - Crystal Structure of Natd Bound to H4/H2A Peptide and Coa
  6. 4uaw (Na: 2) - Dna Polymerase Beta Substrate Complex with A Templating Adenine and Incoming 8-Oxodgtp, 0 S
    Other atoms: Ca (2);
  7. 4uay (Na: 3) - Dna Polymerase Beta Product Complex with A Templating Adenine and Inserted 8-Oxodgmp, 40 S
    Other atoms: Mg (2); Cl (1);
  8. 4ub1 (Na: 2) - Dna Polymerase Beta Product Complex with A Templating Adenine and 8- Oxodgmp, 90 S
  9. 4ub3 (Na: 1) - Dna Polymerase Beta Closed Product Complex with A Templating Cytosine and 8-Oxodgmp, 60 S
    Other atoms: Mg (2);
  10. 4ub5 (Na: 2) - Dna Polymerase Beta Substrate Complex with A Templating Cytosine, Incoming 8-Oxodgtp, and MN2+, 5 S
    Other atoms: Mn (5);
  11. 4ubg (Na: 9) - Resting State of Rat Cysteine Dioxygenase C93G Variant
    Other atoms: Fe (1);
  12. 4ubh (Na: 10) - Resting State of Rat Cysteine Dioxygenase Y157F Variant
    Other atoms: Fe (1); Cl (1);
  13. 4ubt (Na: 1) - Structure of the C93S Variant of the 3-Ketoacyl-Coa Thiolase FADA5 From M. Tuberculosis in Complex with A Steroid and Coa.
    Other atoms: Cl (10);
  14. 4ubw (Na: 1) - Apo Structure of the 3-Ketoacyl-Coa Thiolase FADA5 From M. Tuberculosis
    Other atoms: Cl (1);
  15. 4ubz (Na: 1) - Crystal Structure of A Prion Peptide
  16. 4ud8 (Na: 3) - ATBBE15
    Other atoms: K (1);
  17. 4ud9 (Na: 2) - Thrombin in Complex with 5-Chlorothiophene-2-Carboxamide
    Other atoms: Cl (1);
  18. 4udu (Na: 2) - Crystal Structure of Staphylococcal Enterotoxin E in Complex with A T Cell Receptor
    Other atoms: Zn (1);
  19. 4udw (Na: 2) - Thrombin in Complex with 1-(2R)-2-Amino-3-Phenyl-Propanoyl-N-(2, 5DICHLOROPHENYL)Methylpyrrolidine-2-Carboxamide
    Other atoms: Cl (2);
  20. 4ue7 (Na: 2) - Thrombin in Complex with 1-Amidinopiperidine
    Other atoms: I (1);
  21. 4ue8 (Na: 2) - Complex of D. Melanogaster EIF4E with the 4E Binding Protein Thor
  22. 4ueh (Na: 2) - Thrombin in Complex with Benzamidine
  23. 4ufd (Na: 2) - Thrombin in Complex with 4-(((1-((2S)-1-((2R)-2-( Benzylsulfonylamino)-3-Phenyl-Propanoyl)Pyrrolidin-2-Yl)-1- Oxo-Ethyl)Amino)Methyl)Benzamidine
  24. 4ufe (Na: 2) - Thrombin in Complex with (2R)-2-(Benzylsulfonylamino)-N-(2-( (4-Carbamimidoylphenyl)Methylamino)-2-Oxo-Butyl)-3-Phenyl- Propanamide
  25. 4uff (Na: 2) - Thrombin in Complex with (2R)-2-(Benzylsulfonylamino)-N-(2-( (4-Carbamimidoylphenyl)Methylamino)-2-Oxo-Ethyl)-N-Methyl- 3-Phenyl-Propanamide
  26. 4ufg (Na: 2) - Thrombin in Complex with (2R)-2-(Benzylsulfonylamino)-N-(( 1S)-2-((4-Carbamimidoylphenyl)Methylamino)-1-Methyl-2-Oxo- Ethyl)-N-Methyl-3-Phenyl-Propanamide Ethane
  27. 4ufq (Na: 5) - Structure of A Novel Hyaluronidase (HYAL_SK) From Streptomyces Koganeiensis.
    Other atoms: Cl (1);
  28. 4uhn (Na: 1) - Characterization of A Novel Transaminase From Pseudomonas Sp. Strain Aac
    Other atoms: Mg (1);
  29. 4uhv (Na: 13) - The Structure of VGRG1, the Needle Tip of the Bacterial Type VI Secretion System
    Other atoms: Cl (38);
  30. 4uio (Na: 2) - Structure of the Salmonella Typhi Type I Dehydroquinase Covalently Inhibited By A 3-Dehydroquinic Acid Derivative
    Other atoms: Cl (2);
  31. 4uir (Na: 2) - Structure of Oleate Hydratase From Elizabethkingia Meningoseptica
  32. 4und (Na: 1) - Human ARTD1 (PARP1) - Catalytic Domain in Complex with Inhibitor Talazoparib
    Other atoms: F (4);
  33. 4unq (Na: 1) - Mtb Tmk in Complex with Compound 36
    Other atoms: F (6);
  34. 4uns (Na: 2) - Mtb Tmk in Complex with Compound 40
  35. 4uoj (Na: 3) - Structure of Fungal Beta-Mannosidase (GH2) From Trichoderma Harzianum
    Other atoms: Cd (28); Cl (1); Ca (1);
  36. 4uow (Na: 1) - Crystal Structure of the Titin M10-Obscurin Ig Domain 1 Complex
    Other atoms: Cl (8);
  37. 4uqo (Na: 3) - Rada C-Terminal Atpase Domain From Pyrococcus Furiosus Bound to Adp
    Other atoms: Mg (2);
  38. 4uri (Na: 3) - Crystal Structure of Chitinase-Like Agglutinin Robpscra From Robinia Pseudoacacia
    Other atoms: Cl (2);
  39. 4us3 (Na: 2) - Crystal Structure of the Bacterial Nss Member Mhst in An Occluded Inward-Facing State
  40. 4us4 (Na: 2) - Crystal Structure of the Bacterial Nss Member Mhst in An Occluded Inward-Facing State (Lipidic Cubic Phase Form)
Page generated: Fri Dec 24 09:46:57 2021

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