Atomistry » Sodium » PDB 4r33-4rk5
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Sodium in PDB, part 123 (files: 4881-4920), PDB 4r33-4rk5

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 4881-4920 (PDB 4r33-4rk5).
  1. 4r33 (Na: 1) - X-Ray Structure of the Tryptophan Lyase Nosl with Tryptophan and S- Adenosyl-L-Homocysteine Bound
    Other atoms: K (2); Fe (8); Cl (2);
  2. 4r34 (Na: 2) - X-Ray Structure of the Tryptophan Lyase Nosl with Tryptophan, 5'- Deoxyadenosine and Methionine Bound
    Other atoms: Zn (1); Br (7); Fe (8);
  3. 4r3n (Na: 3) - Crystal Structure of the Ternary Complex of Sp-Asadh with Nadp and 1, 2,3-Benzenetricarboxylic Acid
  4. 4r3w (Na: 3) - Crystal Structure Analysis of the 1,2,3-Tricarboxylate Benzoic Acid Bound to Sp-Asadh-2'5'-Adp Complex
  5. 4r41 (Na: 3) - Complex Crystal Structure of 4-Nitro-2-Phosphono-Benzoic Acid with Sp- Aspartate-Semialdehyde Dehydrogenase and Nicotinamide-Dinucleotide
  6. 4r44 (Na: 4) - Racemic Crystal Structure of A Tetramolecular Dna G-Quadruplex
    Other atoms: K (14);
  7. 4r48 (Na: 1) - Racemic Crystal Structure of A Calcium-Bound Dna Four-Way Junction
    Other atoms: Ca (1);
  8. 4r49 (Na: 2) - Racemic Crystal Structure of A Calcium-Bound B-Dna Duplex
    Other atoms: Ca (7);
  9. 4r4d (Na: 1) - Racemic Crystal Structure of A Magnesium-Bound B-Dna Duplex
    Other atoms: Mg (8);
  10. 4r4j (Na: 2) - Crystal Structure of Complex SP_ASADH with 3-Carboxypropyl-Phthalic Acid and Nicotinamide Adenine Dinucleotide Phosphate
  11. 4r4u (Na: 2) - Crystal Structure of Acyl-Coa Thioesterase Tesb From Yersinia Pestis in Complex with Coenzyme A
  12. 4r51 (Na: 3) - Crystal Complex Structure of Sp-Aspartate-Semialdehyde-Dehydrogenase with Nicotinamide Adenine Dinucleotide Phosphate and Phthalic Acid
  13. 4r54 (Na: 3) - Complex Crystal Structure of Sp-Aspartate-Semialdehyde-Dehydrogenase with 3-Carboxy-Ethyl-Phthalic Acid
  14. 4r5h (Na: 2) - Crystal Structure of Sp-Aspartate-Semialdehyde-Dehydrogenase with Nicotinamide-Adenine-Dinucleotide-Phosphate and 3-Carboxy-Propenyl- Phthalic Acid
  15. 4r5m (Na: 1) - Crystal Structure of Vc-Aspartate Beta-Semialdehyde-Dehydrogenase with Nadp and 4-Nitro-2-Phosphono-Benzoic Acid
  16. 4r60 (Na: 2) - Crystal Structure of Xaa-Pro Dipeptidase From Xanthomonas Campestris
    Other atoms: Mn (4);
  17. 4r63 (Na: 4) - Binary Complex Crystal Structure of R258A Mutant of Dna Polymerase Beta
  18. 4r64 (Na: 2) - Binary Complex Crystal Structure of E295K Mutant of Dna Polymerase Beta
  19. 4r65 (Na: 2) - Ternary Complex Crystal Structure of R258A Mutant of Dna Polymerase Beta
    Other atoms: Mg (2); Cl (6);
  20. 4r66 (Na: 2) - Ternary Complex Crystal Structure of E295K Mutant of Dna Polymerase Beta
    Other atoms: Mn (4); Cl (3);
  21. 4r6c (Na: 2) - X-Ray Diffraction in Temporally and Spatially Resolved Biomolecular Science: the X-Ray Crystal Structure of Hen Egg White Lysozyme Cocrystallized with TA6BR12 and Then A Crystal Soaked in K2PTBR6
    Other atoms: Br (31); Pt (2); Ta (12); Cl (12);
  22. 4r6k (Na: 1) - Crystal Structure of Abc Transporter Substrate-Binding Protein Yeso From Bacillus Subtilis, Target Efi-510761, An Open Conformation
  23. 4r7u (Na: 5) - Structure of Udp-N-Acetylglucosamine 1-Carboxyvinyltransferase From Vibrio Cholerae in Complex with Substrate Udp-N-Acetylglucosamine and the Drug Fosfomycin
  24. 4r8i (Na: 1) - High Resolution Structure of A Mirror-Image Rna Oligonucleotide Aptamer in Complex with the Chemokine CCL2
    Other atoms: Sr (1); K (5);
  25. 4r9i (Na: 1) - Crystal Structure of Cysteine Proteinase Inhibitor SERPIN18 From Bombyx Mori
  26. 4ra5 (Na: 1) - Human Protein Kinase C Theta in Complex with Ligand Compound 11A (6- [(1,3-Dimethyl-Azetidin-3-Yl)-Methyl-Amino]-4(R)-Methyl-7-Phenyl-2, 10-Dihydro-9-Oxa-1,2,4A-Triaza-Phenanthren-3-One)
  27. 4rai (Na: 7) - Crystal Structure of Cng Mimicking Nak-Etpp Mutant in Complex with Na+
  28. 4ras (Na: 3) - Reductive Dehalogenase Structure Suggests A Mechanism For B12- Dependent Dehalogenation
    Other atoms: Co (3); Fe (24); Cl (3);
  29. 4rbm (Na: 3) - Porphyromonas Gingivalis Gingipain K (Kgp) Catalytic and Immunoglobulin Superfamily-Like Domains
    Other atoms: Ni (1); Ca (2);
  30. 4rcx (Na: 1) - Trichomonas Vaginalis Triosephosphate Isomerase TVAG_497370 Gene (Ile- 45 Variant) Loop 3 Deletion Protein
  31. 4rds (Na: 3) - Lysozyme Crystallized with Red Food Coloring Dye
    Other atoms: Cl (3);
  32. 4rfl (Na: 1) - Crystal Structure of G1PDH with Nadph From Methanocaldococcus Jannaschii
    Other atoms: K (4); Zn (4);
  33. 4rgu (Na: 1) - Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid
    Other atoms: Cl (2);
  34. 4rhb (Na: 1) - Crystal Structure of the Lipopolysaccharide Assembly Complex Lptd-Lpte From the Escherichia Coli Outer Membrane
    Other atoms: Cl (4);
  35. 4riz (Na: 3) - The Crystal Structure of Y333Q Mutant Pyridoxal-Dependent Decarboxylase From Sphaerobacter Thermophilus Dsm 20745
  36. 4rj1 (Na: 4) - Structural Variations and Solvent Structure of Uggggu Quadruplexes Stabilized By SR2+ Ions
    Other atoms: Sr (5); Ca (3);
  37. 4rjl (Na: 2) - Gamma Subunit of the Translation Initiation Factor 2 From Sulfolobus Solfataricus Complexed with Gdpcp
    Other atoms: Mg (2);
  38. 4rjy (Na: 6) - Crystal Structure of E. Coli L-Threonine Aldolase in Complex with A Non-Covalently Uncleaved Bound L-Serine Substrate
  39. 4rk4 (Na: 1) - Crystal Structure of Laci Family Transcriptional Regulator From Lactobacillus Casei, Target Efi-512911, with Bound Glucose
  40. 4rk5 (Na: 1) - Crystal Structure of Laci Family Transcriptional Regulator From Lactobacillus Casei, Target Efi-512911, with Bound Sucrose
Page generated: Fri Dec 24 09:46:44 2021

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