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Sodium in PDB 4rgu: Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid

Protein crystallography data

The structure of Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid, PDB code: 4rgu was solved by Y.Kim, G.Joachimiak, L.Bigelow, G.Cobb, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.51 / 1.89
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 63.668, 82.812, 63.165, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 20.6

Other elements in 4rgu:

The structure of Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid (pdb code 4rgu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid, PDB code: 4rgu:

Sodium binding site 1 out of 1 in 4rgu

Go back to Sodium Binding Sites List in 4rgu
Sodium binding site 1 out of 1 in the Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na203

b:92.7
occ:1.00
O B:HOH372 2.5 90.9 1.0
O B:ARG97 2.6 0.7 1.0
O B:THR94 3.1 0.8 1.0
O B:ASP92 3.2 0.0 1.0
C B:ARG97 3.7 0.1 1.0
CA B:ARG98 4.1 94.5 1.0
C B:THR94 4.2 0.2 1.0
CD B:ARG98 4.3 86.6 1.0
N B:ARG98 4.4 0.1 1.0
C B:ASP92 4.4 0.4 1.0
O B:HIS95 4.5 0.2 1.0
C B:HIS95 4.6 0.5 1.0
CA B:HIS95 4.7 0.1 1.0
N B:ARG97 4.8 0.0 1.0
CA B:ARG97 4.8 0.7 1.0
O B:ARG98 4.9 89.7 1.0
N B:HIS95 5.0 1.0 1.0
C B:ARG98 5.0 97.4 1.0

Reference:

Y.Kim, G.Joachimiak, L.Bigelow, G.Cobb, A.Joachimiak. Crystal Structure of Putative Marr Family Transcriptional Regulator Hcar From Acinetobacter Sp. Adp Complexed with Ferulic Acid To Be Published 2014.
Page generated: Mon Oct 7 18:15:02 2024

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