Sodium in PDB, part 79 (files: 3121-3160),
PDB 3r9b-3rn1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 3121-3160 (PDB 3r9b-3rn1).
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3r9b (Na: 2) - Crystal Structure of Mycobacterium Smegmatis CYP164A2 in Ligand Free State
Other atoms:
K (3);
Fe (3);
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3r9c (Na: 1) - Crystal Structure of Mycobacterium Smegmatis CYP164A2 with Econazole Bound
Other atoms:
Fe (1);
Cl (6);
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3ra3 (Na: 1) - Crystal Structure of A Section of A De Novo Design Gigadalton Protein Fibre
Other atoms:
I (2);
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3rac (Na: 2) - Crystal Strucutre of Histidine--Trna Ligase Subunit From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446.
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3rag (Na: 2) - Crystal Structure of Uncharacterized Protein AACI_0196 From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446
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3ray (Na: 2) - Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11
Other atoms:
Zn (1);
Cl (1);
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3rbv (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata Incomplex with Nadp
Other atoms:
Cl (2);
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3rc1 (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata Incomplex with Nadp and Tdp-Benzene
Other atoms:
Cl (2);
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3rc2 (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp; Open Conformation
Other atoms:
Cl (2);
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3rc3 (Na: 1) - Human Mitochondrial Helicase SUV3
Other atoms:
Cl (1);
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3rc7 (Na: 1) - Crystal Structure of the Y186F Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
Other atoms:
Cl (2);
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3rc9 (Na: 1) - Crystal Structure of the K102A Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
Other atoms:
Cl (1);
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3rcb (Na: 1) - Crystal Structure of the K102E Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
Other atoms:
Cl (1);
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3rdq (Na: 1) - Crystal Structure of R7-2 Streptavidin Complexed with Desthiobiotin
Other atoms:
Ni (1);
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3rdv (Na: 1) - Structure of the SLAIN2C-CLIPCG1 Complex
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3re3 (Na: 3) - Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Francisella Tularensis
Other atoms:
Cl (2);
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3rfq (Na: 2) - Crystal Structure of Pterin-4-Alpha-Carbinolamine Dehydratase MOAB2 From Mycobacterium Marinum
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3rga (Na: 1) - Crystal Structure of Epoxide Hydrolase For Polyether Lasalocid A Biosynthesis
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3rh4 (Na: 2) - Dna Polymerase Beta with A Dideoxy-Terminated Primer with An Incoming Ribonucleotide (Rctp)
Other atoms:
Mn (8);
Cl (6);
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3rh5 (Na: 2) - Dna Polymerase Beta Mutant (Y271) with A Dideoxy-Terminated Primer with An Incoming Deoxynucleotide (Dctp)
Other atoms:
Mn (7);
Cl (5);
-
3rh6 (Na: 2) - Dna Polymerase Beta Mutant (Y271) with A Dideoxy-Terminated Primer with An Incoming Ribonucleotide (Rctp)
Other atoms:
Mn (6);
Cl (3);
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3rht (Na: 3) - Crystal Structure of Type 1 Glutamine Amidotransferase (GATASE1)-Like Protein From Planctomyces Limnophilus
Other atoms:
Ca (4);
Cl (2);
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3rje (Na: 4) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG at Template Position
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3rjf (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing (Syn)8ODG at Template Position Paired with Non-Hydrolyzable Datp Analog (Dapcpp)
Other atoms:
Mg (2);
Cl (4);
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3rjg (Na: 2) - Binary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG:Da Base-Pair at Primer Terminus
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3rjh (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing (Syn)8ODG:Da at Primer Terminus and Dg:Dcmp(CF2)Ppin the Active Site
Other atoms:
F (2);
Mg (2);
Cl (4);
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3rji (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG at Template Position Paired with Non-Hydrolyzable Dctp Analog (Dcmp(CF2)Pp)
Other atoms:
F (2);
Mg (2);
Cl (2);
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3rjj (Na: 2) - Ternary Complex Crystal Structure of Dna Polymerase Beta with Template 8ODG Provides Insight Into Mutagenic Lesion Bypass
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3rjk (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG:Dc Base Pair at Primer Terminus and Dg:Dcmp(CF2)Pp in the Active Site
Other atoms:
F (2);
Mg (2);
Cl (3);
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3rlw (Na: 2) - Human Thrombin in Complex with MI328
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3rly (Na: 2) - Human Thrombin in Complex with MI329
-
3rm0 (Na: 2) - Human Thrombin in Complex with MI354
-
3rm2 (Na: 2) - Human Thrombin in Complex with MI003
-
3rml (Na: 2) - Human Thrombin in Complex with MI331
Other atoms:
Cl (1);
-
3rmm (Na: 2) - Human Thrombin in Complex with MI332
Other atoms:
Cl (1);
-
3rmn (Na: 2) - Human Thrombin in Complex with MI341
Other atoms:
Cl (1);
-
3rmo (Na: 2) - Human Thrombin in Complex with MI004
Other atoms:
Cl (1);
-
3rmz (Na: 4) - Crystal Structure of the W199F-Maug/Pre-Methylamine Dehydrogenase Complex
Other atoms:
Fe (4);
Ca (2);
-
3rn0 (Na: 4) - Crystal Structure of the W199K-Maug/Pre-Methylamine Dehydrogenase Complex
Other atoms:
Fe (4);
Ca (2);
-
3rn1 (Na: 4) - Crystal Structure of the W199E-Maug/Pre-Methylamine Dehydrogenase Complex
Other atoms:
Fe (4);
Ca (2);
Page generated: Thu Dec 28 11:17:14 2023
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