Atomistry » Sodium » PDB 3r9b-3rn1
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Sodium in PDB, part 79 (files: 3121-3160), PDB 3r9b-3rn1

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 3121-3160 (PDB 3r9b-3rn1).
  1. 3r9b (Na: 2) - Crystal Structure of Mycobacterium Smegmatis CYP164A2 in Ligand Free State
    Other atoms: K (3); Fe (3);
  2. 3r9c (Na: 1) - Crystal Structure of Mycobacterium Smegmatis CYP164A2 with Econazole Bound
    Other atoms: Fe (1); Cl (6);
  3. 3ra3 (Na: 1) - Crystal Structure of A Section of A De Novo Design Gigadalton Protein Fibre
    Other atoms: I (2);
  4. 3rac (Na: 2) - Crystal Strucutre of Histidine--Trna Ligase Subunit From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446.
  5. 3rag (Na: 2) - Crystal Structure of Uncharacterized Protein AACI_0196 From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446
  6. 3ray (Na: 2) - Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11
    Other atoms: Zn (1); Cl (1);
  7. 3rbv (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata Incomplex with Nadp
    Other atoms: Cl (2);
  8. 3rc1 (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata Incomplex with Nadp and Tdp-Benzene
    Other atoms: Cl (2);
  9. 3rc2 (Na: 1) - Crystal Structure of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp; Open Conformation
    Other atoms: Cl (2);
  10. 3rc3 (Na: 1) - Human Mitochondrial Helicase SUV3
    Other atoms: Cl (1);
  11. 3rc7 (Na: 1) - Crystal Structure of the Y186F Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
    Other atoms: Cl (2);
  12. 3rc9 (Na: 1) - Crystal Structure of the K102A Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
    Other atoms: Cl (1);
  13. 3rcb (Na: 1) - Crystal Structure of the K102E Mutant of KIJD10, A 3-Ketoreductase From Actinomadura Kijaniata in Complex with Tdp-Benzene and Nadp
    Other atoms: Cl (1);
  14. 3rdq (Na: 1) - Crystal Structure of R7-2 Streptavidin Complexed with Desthiobiotin
    Other atoms: Ni (1);
  15. 3rdv (Na: 1) - Structure of the SLAIN2C-CLIPCG1 Complex
  16. 3re3 (Na: 3) - Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Francisella Tularensis
    Other atoms: Cl (2);
  17. 3rfq (Na: 2) - Crystal Structure of Pterin-4-Alpha-Carbinolamine Dehydratase MOAB2 From Mycobacterium Marinum
  18. 3rga (Na: 1) - Crystal Structure of Epoxide Hydrolase For Polyether Lasalocid A Biosynthesis
  19. 3rh4 (Na: 2) - Dna Polymerase Beta with A Dideoxy-Terminated Primer with An Incoming Ribonucleotide (Rctp)
    Other atoms: Mn (8); Cl (6);
  20. 3rh5 (Na: 2) - Dna Polymerase Beta Mutant (Y271) with A Dideoxy-Terminated Primer with An Incoming Deoxynucleotide (Dctp)
    Other atoms: Mn (7); Cl (5);
  21. 3rh6 (Na: 2) - Dna Polymerase Beta Mutant (Y271) with A Dideoxy-Terminated Primer with An Incoming Ribonucleotide (Rctp)
    Other atoms: Mn (6); Cl (3);
  22. 3rht (Na: 3) - Crystal Structure of Type 1 Glutamine Amidotransferase (GATASE1)-Like Protein From Planctomyces Limnophilus
    Other atoms: Ca (4); Cl (2);
  23. 3rje (Na: 4) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG at Template Position
  24. 3rjf (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing (Syn)8ODG at Template Position Paired with Non-Hydrolyzable Datp Analog (Dapcpp)
    Other atoms: Mg (2); Cl (4);
  25. 3rjg (Na: 2) - Binary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG:Da Base-Pair at Primer Terminus
  26. 3rjh (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing (Syn)8ODG:Da at Primer Terminus and Dg:Dcmp(CF2)Ppin the Active Site
    Other atoms: F (2); Mg (2); Cl (4);
  27. 3rji (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG at Template Position Paired with Non-Hydrolyzable Dctp Analog (Dcmp(CF2)Pp)
    Other atoms: F (2); Mg (2); Cl (2);
  28. 3rjj (Na: 2) - Ternary Complex Crystal Structure of Dna Polymerase Beta with Template 8ODG Provides Insight Into Mutagenic Lesion Bypass
  29. 3rjk (Na: 2) - Ternary Complex of Dna Polymerase Beta with A Gapped Dna Containing 8ODG:Dc Base Pair at Primer Terminus and Dg:Dcmp(CF2)Pp in the Active Site
    Other atoms: F (2); Mg (2); Cl (3);
  30. 3rlw (Na: 2) - Human Thrombin in Complex with MI328
  31. 3rly (Na: 2) - Human Thrombin in Complex with MI329
  32. 3rm0 (Na: 2) - Human Thrombin in Complex with MI354
  33. 3rm2 (Na: 2) - Human Thrombin in Complex with MI003
  34. 3rml (Na: 2) - Human Thrombin in Complex with MI331
    Other atoms: Cl (1);
  35. 3rmm (Na: 2) - Human Thrombin in Complex with MI332
    Other atoms: Cl (1);
  36. 3rmn (Na: 2) - Human Thrombin in Complex with MI341
    Other atoms: Cl (1);
  37. 3rmo (Na: 2) - Human Thrombin in Complex with MI004
    Other atoms: Cl (1);
  38. 3rmz (Na: 4) - Crystal Structure of the W199F-Maug/Pre-Methylamine Dehydrogenase Complex
    Other atoms: Fe (4); Ca (2);
  39. 3rn0 (Na: 4) - Crystal Structure of the W199K-Maug/Pre-Methylamine Dehydrogenase Complex
    Other atoms: Fe (4); Ca (2);
  40. 3rn1 (Na: 4) - Crystal Structure of the W199E-Maug/Pre-Methylamine Dehydrogenase Complex
    Other atoms: Fe (4); Ca (2);
Page generated: Fri Dec 24 09:43:23 2021

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