Sodium in PDB, part 217 (files: 8641-8680),
PDB 6r85-6rkz
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 8641-8680 (PDB 6r85-6rkz).
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6r85 (Na: 2) - Structure of Arabidopsis Thaliana GLR3.3 Ligand-Binding Domain in Complex with L-Glutamate
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6r88 (Na: 3) - Structure of Arabidopsis Thaliana GLR3.3 Ligand-Binding Domain in Complex with Glycine
Other atoms:
Cl (2);
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6r89 (Na: 2) - Structure of Arabidopsis Thaliana GLR3.3 Ligand-Binding Domain in Complex with L-Cysteine
Other atoms:
Cl (1);
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6r8a (Na: 1) - Structure of Arabidopsis Thaliana GLR3.3 Ligand-Binding Domain in Complex with L-Methionine
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6r8g (Na: 1) - Crystal Structure of Malate Dehydrogenase From Plasmodium Falciparum in Complex with 4-(3,4-Difluorophenyl)Thiazol-2-Amine
Other atoms:
F (8);
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6r8t (Na: 3) - Crystal Structure of AIF2GAMMA Subunit I181T From Archaeon Sulfolobus Solfataricus Complexed with Gdpcp
Other atoms:
Mg (1);
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6rbi (Na: 2) - Crystal Structure of KDM5B in Complex with 5-(1H-Tetrazol-5-Yl) Quinolin-8-Ol
Other atoms:
Mn (1);
Zn (2);
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6rca (Na: 3) - X-Ray Structure Uridine Phosphorylase From Vibrio Cholerae in Complex with 2.2'-Anhydrouridine at 1.34 A
Other atoms:
Mg (1);
Cl (2);
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6rcc (Na: 1) - Domain C P140 Mycoplasma Genitalium
Other atoms:
Cl (1);
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6rch (Na: 2) - Crystal Structure of Casein Kinase I Isoform Delta (CK1 Delta) Complexed with SR4133 Inhibitor
Other atoms:
F (2);
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6rex (Na: 5) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric Form, pH 6.0
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6rez (Na: 5) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric Form, pH 5.0
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6rf0 (Na: 5) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric "Dry" Form
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6rf1 (Na: 5) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Pentameric "Wet" Form
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6rf3 (Na: 5) - Crystal Structure of the Potassium-Pumping G263F Mutant of the Light- Driven Sodium Pump KR2 in the Pentameric Form, pH 8.0
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6rf4 (Na: 5) - Crystal Structure of the Potassium-Pumping S254A Mutant of the Light- Driven Sodium Pump KR2 in the Pentameric Form, pH 8.0
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6rf5 (Na: 1) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Monomeric Form, pH 6.0
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6rf6 (Na: 1) - Crystal Structure of the Light-Driven Sodium Pump KR2 in the Monomeric Form, pH 8.0
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6rf9 (Na: 1) - Crystal Structure of the Y154F Mutant of the Light-Driven Sodium Pump KR2 in the Monomeric Form, pH 8.0
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6rfa (Na: 1) - Crystal Structure of the H30K Mutant of the Light-Driven Sodium Pump KR2 in the Monomeric Form, pH 8.0
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6rfb (Na: 1) - Crystal Structure of the Potassium-Pumping S254A Mutant of the Light- Driven Sodium Pump KR2 in the Monomeric Form, pH 4.3
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6rfc (Na: 1) - Crystal Structure of the Potassium-Pumping G263F Mutant of the Light- Driven Sodium Pump KR2 in the Monomeric Form, pH 4.3
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6rfz (Na: 1) - Photorhabdus Laumondii Lectin PLL2 in Complex with D-Glucose
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6rg1 (Na: 6) - Photorhabdus Laumondii Lectin PLL2 in Complex with L-Rhamnose
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6rg2 (Na: 2) - Photorhabdus Laumondii Lectin PLL2 in Complex with 3-O-Methyl-D- Glucose
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6rgg (Na: 5) - Photorhabdus Laumondii Lectin PLL2 in Complex with O-Methylated Pgl-1- Derived Disaccharide
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6rgj (Na: 4) - Photorhabdus Asymbiotica Lectin Phl in Complex with D-Glucose
Other atoms:
Cl (7);
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6rgm (Na: 1) - Urate Oxidase Under 130 Bar of Krypton
Other atoms:
Kr (3);
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6rgn (Na: 1) - BTEA131
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6rgr (Na: 4) - Photorhabdus Asymbiotica Lectin Phl in Complex with L-Rhamnose
Other atoms:
Cl (3);
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6rgu (Na: 3) - Photorhabdus Asymbiotica Lectin Phl in Complex with 3-O-Methyl-D- Glucose
Other atoms:
Cl (5);
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6rgw (Na: 2) - Photorhabdus Asymbiotica Lectin Phl in Complex with O-Methylated Pgl- 1-Derived Disaccharide
Other atoms:
Cl (1);
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6rij (Na: 4) - CDK2/Cyclin A2 in Complex with Open-Ring 5-Nitrosopyrimidine Inhibitor LC436
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6riv (Na: 6) - Crystal Structure of Alopecurus Myosuroides Gstf
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6rj4 (Na: 1) - Molybdenum Storage Protein - P6422, Adp
Other atoms:
Mg (4);
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6rjb (Na: 2) - Human Transketolase Variant T382E
Other atoms:
Mg (2);
Ca (2);
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6rjc (Na: 2) - E.Coli Transketolase Apoenzyme
Other atoms:
Ca (2);
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6rjn (Na: 4) - Crystal Structure of A Fungal Catalase at 2.3 Angstroms
Other atoms:
K (7);
Fe (4);
Cl (5);
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6rk1 (Na: 3) - Crystal Structure of TSP1 Domain From CCN3
Other atoms:
Cl (6);
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6rkz (Na: 2) - Recombinant Pseudomonas Stutzeri Nitrous Oxide Reductase, Form II
Other atoms:
K (2);
Ca (2);
Cl (3);
Cu (12);
Page generated: Sat Aug 23 06:29:35 2025
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