Sodium in PDB, part 215 (files: 8561-8600),
PDB 6qdt-6qtp
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 8561-8600 (PDB 6qdt-6qtp).
-
6qdt (Na: 5) - Crystal Structure of 14-3-3SIGMA in Complex with A RAPGEF2 PT740 Phosphopeptide
Other atoms:
Ca (1);
Cl (1);
-
6qdu (Na: 2) - Crystal Structure of 14-3-3SIGMA in Complex with A RAPGEF2 PT740 Phosphopeptide Inhibited By Semi-Synthetic Fusicoccane Fc-Ncpc
Other atoms:
Cl (1);
-
6qen (Na: 1) - Crystal Structure of Porcine Pancreatic Elastase (Ppe) in Complex with the 3-Oxo-Beta-Sultam Inhibitor LMC240
Other atoms:
Br (1);
-
6qeo (Na: 1) - Crystal Structure of Porcine Pancreatic Elastase (Ppe) in Complex with the 3-Oxo-Beta-Sultam Inhibitor LMC269
-
6qf2 (Na: 1) - X-Ray Structure of Thermolysin Crystallized on A Silicon Chip
Other atoms:
Zn (2);
Ca (4);
-
6qf3 (Na: 4) - X-Ray Structure of Thermolysin Soaked with Sodium Aspartate on A Silicon Chip
Other atoms:
Zn (1);
Ca (4);
-
6qfe (Na: 2) - Crystal Structure of Human Kallikrein 5 in Complex with GSK144
-
6qgd (Na: 1) - Structure of Human Mcl-1 in Complex with Thienopyrimidine Inhibitor
-
6qhe (Na: 4) - Alcohol Dehydrogenase From Arthrobacter Sp. Ts-15 in Complex with Nad+
-
6qhj (Na: 1) - High-Resolution Crystal Structure of Calcium- and Sodium-Bound Mouse Olfactomedin-1 Beta-Propeller Domain
Other atoms:
Ca (1);
-
6qi4 (Na: 2) - Ncs-1 Bound to A Ligand
Other atoms:
Ca (6);
-
6qju (Na: 2) - Crystal Structure of Human Bromodomain Containing Protein 3 (BRD3) in Complex with 3-Bromo-1H-Indazol-5-Amine
Other atoms:
Br (1);
-
6ql1 (Na: 1) - Crystal Structure of Chimeric Carbonic Anhydrase VI with 4-[(4,6- Dimethylpyrimidin-2-Yl)Thio]-2,3,5,6-Tetrafluorobenzenesulfonamide
Other atoms:
F (12);
Zn (1);
-
6qlh (Na: 1) - Crystal Structure of Ubix in Complex with Reduced Fmn and Isopentyl Monophosphate
-
6qli (Na: 1) - Crystal Structure of F181Q Ubix in Complex with Fmn and Dimethylallyl Monophosphate
-
6qlj (Na: 1) - Crystal Structure of F181Q Ubix in Complex with An Oxidised N5-C1' Adduct Derived From Dmap
-
6qlk (Na: 1) - Crystal Structure of F181H Ubix in Complex with Prfmn
-
6qll (Na: 1) - Crystal Structure of F181H Ubix in Complex with Fmn and Dimethylallyl Monophosphate
-
6qlm (Na: 1) - Cathepsin-K in Complex with Miv-701
Other atoms:
F (2);
-
6qlv (Na: 7) - Crystal Structure of W200H Ubix in Complex with A Geranyl-Fmn N5 Adduct
-
6qlw (Na: 2) - Cathepsin-K in Complex with Miv-710
Other atoms:
F (4);
Cl (11);
-
6qm2 (Na: 1) - Nlaiv Restriction Endonuclease
Other atoms:
K (1);
-
6qm3 (Na: 2) - Crystal Structure of A Calcium- and Sodium-Bound Mouse Olfactomedin-1 Disulfide-Linked Dimer of the Olfactomedin Domain and Part of Coiled Coil
Other atoms:
As (1);
Ca (2);
-
6qmp (Na: 1) - Nf-Yb/C Heterodimer in Complex with Nf-Ya Peptide
-
6qmq (Na: 1) - Nf-Yb/C Heterodimer in Complex with Nf-Ya-Derived Peptide Stabilized with C8-Hydrocarbon Linker
-
6qn4 (Na: 1) - Death-Associated Protein Kinase 1 (DAPK1) Catalytic and Auto- Regulatory Domains with S289E and S308E Mutations
-
6qq3 (Na: 5) - The Room Temperature Structure of Lysozyme Via the Acoustic Levitation of A Droplet
Other atoms:
Cl (1);
-
6qrr (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 0.13 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qrs (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 0.13 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qrt (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 1.38 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qru (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 2.01 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qrv (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 2.63 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qrw (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 3.25 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qrx (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - 3.88 Mgy
Other atoms:
Mg (2);
Mn (4);
-
6qry (Na: 2) - X-Ray Radiation Dose Series on Xylose Isomerase - Merged Data
Other atoms:
Mg (2);
Mn (4);
-
6qsi (Na: 2) - Pseudomonas Fluorescens Pf-5 Thiamine Diphosphate-Dependent 4- Hydroxybenzoylformate Decarboxylase
-
6qsk (Na: 1) - Crystal Structure of A Nucleotide Sugar Transporter with Bound Nucleotide Monophosphate.
-
6qsr (Na: 1) - The Dehydratase Heterocomplex Apei:P From Xenorhabdus Doucetiae
-
6qtk (Na: 1) - 2.31A Structure of Gepotidacin with S.Aureus Dna Gyrase and Doubly Nicked Dna
Other atoms:
Mn (3);
-
6qtp (Na: 1) - 2.37A Structure of Gepotidacin with S.Aureus Dna Gyrase and Uncleaved Dna
Other atoms:
Mn (3);
Page generated: Mon Dec 15 11:15:21 2025
|
