Sodium in PDB, part 139 (files: 5521-5560),
PDB 5cd1-5cwl
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 5521-5560 (PDB 5cd1-5cwl).
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5cd1 (Na: 2) - Structure of An Asymmetric Tetramer of Human Trna M1A58 Methyltransferase in A Complex with Sah and TRNA3LYS
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5cdm (Na: 1) - 2.5A Structure of Qpt-1 with S.Aureus Dna Gyrase and Dna
Other atoms:
Mn (2);
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5cdn (Na: 1) - 2.8A Structure of Etoposide with S.Aureus Dna Gyrase and Dna
Other atoms:
Mn (4);
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5cdo (Na: 5) - 3.15A Structure of Qpt-1 with S.Aureus Dna Gyrase and Dna
Other atoms:
Mn (4);
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5cdp (Na: 2) - 2.45A Structure of Etoposide with S.Aureus Dna Gyrase and Dna
Other atoms:
Mn (4);
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5cdv (Na: 1) - Proline Dipeptidase From Deinococcus Radiodurans R1
Other atoms:
Mn (1);
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5ce6 (Na: 1) - N-Terminal Domain of Fact Complex Subunit SPT16 From Cicer Arietinum (Chickpea)
Other atoms:
K (1);
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5ce9 (Na: 7) - Structure of Tyrosinase From Walnut (Juglans Regia)
Other atoms:
Cu (4);
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5ceg (Na: 1) - X-Ray Structure of Toxin/Anti-Toxin Complex From Mesorhizobium Opportunistum
Other atoms:
I (8);
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5cfy (Na: 12) - Crystal Structure of Gltph R397A in Complex with Na+ and L-Asp
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5cgi (Na: 2) - Yeast 20S Proteasome BETA5-G48C Mutant in Complex with Onx 0914
Other atoms:
Mg (8);
Cl (2);
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5cgm (Na: 19) - Structure of Mycobacterium Thermoresistibile Glge in Complex with Maltose at 1.95A Resolution
Other atoms:
Cl (2);
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5cgx (Na: 1) - Crystal Structure of Fox-4 Cephamycinase Mutant Y150F Complexed with Cefoxitin
Other atoms:
Zn (6);
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5ch7 (Na: 4) - Crystal Structure of the Perchlorate Reductase Pcrab - PHE164 Gate Switch Intermediate - From Azospira Suillum Ps
Other atoms:
Mo (3);
Zn (3);
Fe (57);
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5chc (Na: 8) - Crystal Structure of the Perchlorate Reductase Pcrab - Substrate Analog SEO3 Bound - From Azospira Suillum Ps
Other atoms:
Mo (3);
Zn (3);
Fe (57);
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5chm (Na: 1) - Crystal Structure of Fox-4 Cephamycinase Complexed with Ceftazidime Batsi (LP06)
Other atoms:
Zn (5);
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5chs (Na: 1) - N-Terminal Domain of the Vesicular Stomatitis Virus L Protein
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5ci9 (Na: 1) - Crystal Structure of Human Tob in Complex with Inhibitor Fragment 6
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5ckd (Na: 1) - E. Coli Mazf E24A Form III
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5ckf (Na: 1) - E. Coli Mazf E24A Form I
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5ckq (Na: 1) - CUB1-Egf-CUB2 Domains of Rat Masp-1
Other atoms:
Ca (3);
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5cl2 (Na: 2) - Crystal Structure of SPO0M, Sporulation Control Protein, From Bacillus Subtilis.
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5clw (Na: 1) - Crystal Structure of Human Glycogen Branching Enzyme (GBE1) in Complex with Maltoheptaose
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5cm6 (Na: 2) - Crystal Structure of A Trap Periplasmic Solute Binding Protein From Pseudoalteromonas Atlantica T6C(PATL_2292, Target Efi-510180) with Bound Sodium and Pyruvate
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5cm7 (Na: 2) - Structure of Thiamine-Monophosphate Kinase From Acinetobacter Baumannii in Complex with Adenosine Diphosphate (Adp) and Thiamine Diphosphate (Tpp)
Other atoms:
Mg (4);
Ca (6);
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5cmr (Na: 3) - Crystal Structure of Linker-Mediated Zn-Bound Human H-Ferritin Variant 122H-Delta C-Star
Other atoms:
Zn (2);
-
5cni (Na: 2) - MGLU2 with Glutamate
Other atoms:
Cl (2);
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5cnx (Na: 1) - Crystal Structure of Xaa-Pro Aminopeptidase From Escherichia Coli K12
Other atoms:
As (3);
Zn (6);
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5cof (Na: 1) - Crystal Structure of Uncharacterised Protein Q1R1X2 From Escherichia Coli UTI89
Other atoms:
Ca (2);
Cl (1);
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5com (Na: 1) - Crystal Structure of Uncharacterized Protein Q187F5 From Clostridium Difficile 630
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5coq (Na: 1) - The Effect of Valine to Alanine Mutation on Inha Enzyme Crystallization Pattern and Substrate Binding Loop Conformation and Flexibility
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5coz (Na: 1) - Crystal Structure of An Uncharacterized Protein (EUBREC_2869) From Eubacterium Rectale Atcc 33656 at 1.45 A Resolution
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5cp0 (Na: 1) - Mas Complex Structure of Peptide Deformylase From Xanthomonas Oryzae Pv Oryzae
Other atoms:
Cd (5);
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5cpd (Na: 2) - Methionine-Alanine Complex Structure of Peptide Deformylase From Xanthomonas Oryzae Pv. Oryzae
Other atoms:
Cd (3);
-
5cqk (Na: 1) - Crystal Structure of the Cancer Genomic Dna Mutator APOBEC3B
Other atoms:
Zn (1);
-
5cvk (Na: 1) - Structure of XOO1075, A Peptide Deformyase From Xanthomonas Oryzae Pv. Oryze, in Complex with Fragment 493
Other atoms:
Cd (5);
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5cvp (Na: 2) - Structure of XOO1075, A Peptide Deformylase From Xanthomonas Oryzae Pv Oryze, in Complex with Fragment 571
Other atoms:
Cd (5);
Cl (1);
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5cvy (Na: 15) - The Structure of Bacillus Pumilus GH48 in Complex with Cellobiose and Cellohexaose
Other atoms:
Ca (1);
-
5cw2 (Na: 1) - Crystal Structure of Epoxide Hydrolase A From Mycobacterium Thermoresistibile
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5cwl (Na: 1) - Crystal Structure of De Novo Designed Helical Repeat Protein DHR54
Page generated: Tue Feb 25 11:36:25 2025
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