Sodium in PDB, part 305 (files: 12161-12200),
PDB 9ewd-9fdv
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12161-12200 (PDB 9ewd-9fdv).
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9ewd (Na: 2) - Dna Polymerase Lambda I493K E529D, Tmp:at CA2+ Ground State Ternary Complex
Other atoms:
K (2);
Ca (1);
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9ewe (Na: 2) - Dna Polymerase Lambda I493K, E529D, CA2+ Ground State Ternary Complex
Other atoms:
Ca (1);
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9ewg (Na: 3) - Dna Polymerase Lambda I493K, Ttp:at CA2+ Ground State Ternary Complex
Other atoms:
Ca (2);
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9ewp (Na: 2) - Crystal Structure of Yeast E2 Ubiquitin-Conjugating Enzyme UBC6 Ubc Domain
Other atoms:
Cl (3);
Cd (4);
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9exm (Na: 1) - Cryogenic Apo Structures of Soluble Epoxide Hydrolase
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9ez6 (Na: 2) - Complex of A Mutant of the Sars-Cov-2 Main Protease Mpro with the NSP14/15 Substrate Peptide.
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9f0u (Na: 1) - Structure of Kpc-2 Complexed with Benzoxaborole Ak-425
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9f7l (Na: 17) - Bartonella Henselae Nrnc Bound to Deoxy-Pgg
Other atoms:
Cl (2);
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9f7m (Na: 10) - Blastococcus Orn Bound to Pgg
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9f7p (Na: 2) - Sars-Cov-2 Papain-Like Protease (Plpro) C112S Mutant
Other atoms:
Cl (2);
Zn (1);
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9f7s (Na: 3) - Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant
Other atoms:
Zn (1);
Cl (2);
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9f7t (Na: 1) - Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-K229R Mutant: Dimer
Other atoms:
Zn (1);
Cl (2);
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9f7u (Na: 3) - Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-Q222D-K229R-Q230R- C271S Mutant
Other atoms:
Cl (2);
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9f7y (Na: 3) - Sars-Cov-2 Papain-Like Protease (Plpro) C112S-K191D-Q222D-K229R-Q230R- C271S Mutant
Other atoms:
Zn (1);
Cl (2);
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9f80 (Na: 1) - Crystal Structure of RV2242 Regulator C-Terminal Fragment (161-414)
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9f8x (Na: 3) - Low-Dose Structure of Marinobacter Nauticus Nitrous Oxide Reductase
Other atoms:
Ca (8);
Cl (4);
Cu (24);
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9fa5 (Na: 1) - Lysozyme Structure at Room Temperature By Serial Synchrotron Crystallography with Coc Chips
Other atoms:
Cl (1);
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9fbo (Na: 1) - Deletion Mutant of Chitinase MMCHI60
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9fbp (Na: 2) - Deletion Mutant MMCHI60
-
9fbq (Na: 2) - Deletion Mutant of Chitinase MMCHI60
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9fbr (Na: 1) - Deletion Mutant of Chitinase MMCHI60
Other atoms:
Ca (1);
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9fbs (Na: 1) - Deletion Mutant of Chitinase MMCHI60
Other atoms:
Ca (1);
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9fc3 (Na: 2) - Hen Egg-White Lysozyme Incubated at 99% Relative Humidity
Other atoms:
Cl (2);
-
9fc4 (Na: 2) - Hen Egg-White Lysozyme Incubated at 94% Relative Humidity
Other atoms:
Cl (2);
-
9fc5 (Na: 2) - Hen Egg-White Lysozyme Incubated at 99% Relative Humidity
Other atoms:
Cl (2);
-
9fc6 (Na: 2) - Hen Egg-White Lysozyme Incubated at 87% Relative Humidity
Other atoms:
Cl (2);
-
9fc7 (Na: 2) - Hen Egg-White Lysozyme Incubated at 99% Relative Humidity
Other atoms:
Cl (3);
-
9fc8 (Na: 2) - Hen Egg-White Lysozyme Incubated at 60% Relative Humidity
Other atoms:
Cl (4);
-
9fc9 (Na: 2) - Hen Egg-White Lysozyme Incubated at 50% Relative Humidity
Other atoms:
Cl (4);
-
9fca (Na: 2) - Hen Egg-White Lysozyme Incubated at 40% Relative Humidity
Other atoms:
Cl (4);
-
9fcb (Na: 2) - Hen Egg-White Lysozyme Incubated at 34% Relative Humidity
Other atoms:
Cl (4);
-
9fcc (Na: 2) - Hen Egg-White Lysozyme Incubated at 80% Relative Humidity
Other atoms:
Cl (2);
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9fcf (Na: 1) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Profar
Other atoms:
Cl (1);
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9fcg (Na: 2) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Prfar
Other atoms:
Cl (2);
-
9fcq (Na: 1) - Cysg(N-16)-H122A Mutant in Complex with Sah From Kitasatospora Cystarginea
Other atoms:
Ca (1);
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9fdh (Na: 1) - Closed Human Phosphoglycerate Kinase Complex with Bpg and Adp Produced By Cross-Soaking A Tsa Crystal
Other atoms:
Mg (1);
Cl (1);
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9fdj (Na: 8) - Crystal Structure of the Nuoef Variant R66G (Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions (Short Soak)
Other atoms:
Cl (4);
Fe (12);
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9fdk (Na: 7) - Crystal Structure of Oxidized Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Cl (3);
Fe (12);
-
9fdn (Na: 1) - Human Phosphoglycerate Kinase in Complex with Atp and 3PG Formed By Cross-Soaking A Tsa Crystal
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9fdv (Na: 16) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (3);
Page generated: Sat Aug 23 06:32:58 2025
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