Sodium in PDB, part 293 (files: 11681-11720),
PDB 8sbf-8sv0
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11681-11720 (PDB 8sbf-8sv0).
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8sbf (Na: 3) - Full-Length Structure of the Lysr-Type Transcriptional Regulator, ACIAD0746, From Acinetobacter Baylyi
Other atoms:
Mg (4);
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8sbm (Na: 1) - Crystal Structure of the Wild-Type Catalytic Atp-Binding Domain of Mtb Doss
Other atoms:
Zn (4);
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8sf6 (Na: 13) - Promiscuous Amino Acid Gamma Synthase From Caldicellulosiruptor Hydrothermalis in Closed Conformation
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8sfs (Na: 3) - High Affinity Nanobodies Against Gfp
Other atoms:
Cl (4);
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8sfv (Na: 11) - High Affinity Nanobodies to Gfp
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8sfx (Na: 19) - High Affinity Nanobodies Against Gfp
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8sfz (Na: 2) - High Affinity Nanobodies Against Gfp
Other atoms:
K (3);
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8sgb (Na: 1) - Crystal Structure of CD1D-Lipid Complexed with Beta-2-Microglobulin, Tcr Alpha-Chain and Tcr Beta-Chain
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8sgd (Na: 13) - Crystal Structure of CDC3(G) - CDC10(Delta 1-10) Heterocomplex From Saccharomyces Cerevisiae
Other atoms:
Mg (2);
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8sgi (Na: 3) - Cryo-Em Structure of Human NCX1 in Complex with SEA0400
Other atoms:
Ca (6);
F (2);
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8sgj (Na: 3) - Cryo-Em Structure of Human NCX1 in Apo Inactivated State
Other atoms:
Ca (6);
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8si2 (Na: 2) - Cryo-Em Structure of TRPM7 in MSP2N2 Nanodisc in Apo State
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8sig (Na: 1) - Crystal Structure of PRMT4 with Compound YD1-288
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8sjj (Na: 8) - X-Ray Structure of the Metastable SEPT14-SEPT7 Heterodimeric Coiled Coil
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8skl (Na: 1) - PTP1B in Complex with 182
Other atoms:
F (1);
Cl (2);
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8slc (Na: 1) - High Affinity Nanobodies Against Gfp
Other atoms:
Cl (4);
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8slx (Na: 1) - Rat TRPV2 Bound with 1 Cbd Ligand in Nanodiscs
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8sly (Na: 1) - Rat TRPV2 Bound with 2 Cbd Ligands in Nanodiscs
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8sm7 (Na: 3) - Air-Oxidized G. Y4 Truffo Expressed From M9 Minimal Medium Supplemented with Fe
Other atoms:
Fe (8);
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8smh (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcggaagtggg)
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8sng (Na: 2) - Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)
Other atoms:
Mg (2);
-
8sp1 (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcgiaagtggg)
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8srx (Na: 2) - Crystal Structure of Bak-Bax Heterodimer with Lysopc
Other atoms:
Cl (1);
Zn (1);
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8ss5 (Na: 1) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State)
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8ss6 (Na: 1) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
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8ss7 (Na: 1) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
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8ss8 (Na: 2) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
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8ss9 (Na: 2) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
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8ssq (Na: 2) - Znfs 3-11 of Ccctc-Binding Factor (Ctcf) Complexed with 35MER Dna 35-4
Other atoms:
Zn (17);
-
8ssr (Na: 2) - Znfs 3-11 of Ccctc-Binding Factor (Ctcf) Complexed with 35MER Dna 35- 20
Other atoms:
Zn (17);
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8sss (Na: 1) - Znfs 1-7 of Ccctc-Binding Factor (Ctcf) Complexed with 23MER
Other atoms:
Zn (14);
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8ssz (Na: 1) - The 2ALPHA3BETA Stoichiometry of Full-Length Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine and Calcium
Other atoms:
Ca (2);
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8st0 (Na: 1) - The 2ALPHA3BETA Stoichiometry of Full-Length Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine
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8st1 (Na: 1) - The 3ALPHA2BETA Stoichiometry of Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine and Calcium
Other atoms:
Ca (4);
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8st2 (Na: 1) - The 3ALPHA2BETA Stoichiometry of Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine
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8st3 (Na: 1) - The 2ALPHA3BETA Stoichiometry of Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine and Calcium
Other atoms:
Ca (3);
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8st4 (Na: 1) - The 2ALPHA3BETA Stoichiometry of Human ALPHA4BETA2 Nicotinic Acetylcholine Receptor in Complex with Acetylcholine
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8st6 (Na: 2) - Hsa Siglec + Unique Domains Bound to NEU5GC ALPHA2,3 Gal Beta Ome
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8stn (Na: 1) - Crystal Structure of Kras-G12D/G75A Mutant, Gdp-Bound
Other atoms:
Cl (2);
Mg (2);
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8sv0 (Na: 2) - The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and Nuclear Localisation Signal Sequence in Psittacine Siadenovirus Core Protein VII
Page generated: Mon Dec 15 11:18:21 2025
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