Sodium in PDB, part 289 (files: 11521-11560),
PDB 8pum-8qh4
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11521-11560 (PDB 8pum-8qh4).
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8pum (Na: 2) - THA1 L-Threonine Aldolase (Mouse), Monoclinic Form (C2)
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8pvo (Na: 2) - Crystal Structure of Human Casein Kinase II Subunit Alpha (CK2A1) in Complex with Allosteric Compound FG5
Other atoms:
Cl (2);
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8pwk (Na: 1) - Human HINT1 in Complex with Compound AT8003
Other atoms:
F (1);
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8pxt (Na: 4) - Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood
Other atoms:
Cl (1);
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8pxv (Na: 1) - Targeting Extended Blood Antigens By Akkermansia Muciniphila Enzymes Unveils A Missing Link For Generating Universal Donor Blood
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8py0 (Na: 2) - Sensor Domain of Oscillibacter Ruminantium Chemoreceptor in Complex with Formate.
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8pyo (Na: 1) - 5 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
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8pyp (Na: 1) - 25 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
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8pyq (Na: 1) - 10 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
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8pz0 (Na: 5) - Intracellular Leucine Aminopeptidase of Pseudomonas Aeruginosa PA14.
Other atoms:
Cl (5);
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8pzo (Na: 4) - Lpdd
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8pzy (Na: 1) - Intracellular Leucine Aminopeptidase of Pseudomonas Aeruginosa PA14 - Hexameric Assembly with Manganese Bound
Other atoms:
Mn (12);
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8q00 (Na: 2) - Tssm-Ub-Pa Complex - A Usp-Like Dub From B. Pseudomallei (193-430) Reacted with Ub-Pa
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8q1f (Na: 1) - D10N,P146A Variant of Beta-Phosphoglucomutase From Lactococcus Lactis in Complex with Native Beta-Glucose 1,6-Bisphosphate Intermediate
Other atoms:
Mg (6);
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8q1r (Na: 1) - Mouse KEAP1 in Complex with Stapled Peptide
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8q1s (Na: 1) - Pathogenic Mutations of Human Phosphorylation Sites Affect Protein- Protein Interactions
Other atoms:
Br (1);
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8q1w (Na: 3) - TTX183B - A C-Type Cytochrome Domain From the Teredinibacter Turnerae Protein TERTU_2913
Other atoms:
Cl (2);
Fe (3);
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8q21 (Na: 1) - Crystal Structure of Vanadium-Dependent Haloperoxidase R425S Mutant (A. Marina)
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8q22 (Na: 2) - Crystal Structure of Vanadium-Dependent Haloperoxidase R425S Mutant in Complex with 1,3,5-Trimethoxybenzene (A. Marina)
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8q2o (Na: 5) - Structure of Alginate Transporter Alge From P. Aeruginosa PAO1 By Using Se-Mag For the the Lipid Cubic Phase Crystallization
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8q3v (Na: 6) - Cryo-Em Structure of the Methanogenic Na+ Translocating N5-Methyl- H4MPT:Com Methyltransferase Complex
Other atoms:
Mg (3);
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8q57 (Na: 2) - Crystal Structure of Class II Sfp Aldolase From Yersinia Aldovae (Yasqia-Zn-SO4) with Bound Sulfate Ions
Other atoms:
Zn (4);
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8q59 (Na: 2) - Crystal Structure of Metal-Dependent Class II Sulfofructose Phosphate Aldolase From Yersinia Aldovae in Complex with Sulfofructose Phosphate (Yasqia-Zn-Sfp)
Other atoms:
Zn (2);
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8q5z (Na: 1) - Crystal Structure of Bovine Thiosulfate Sulfurtransferase
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8q6k (Na: 1) - Human Igd Fab in Complex with An Orthosteric Inhibitor of Phl P 7
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8q6s (Na: 2) - A Carbohydrate Esterase Family 15 (CE15) Glucuronoyl Esterase From Phocaeicola Vulgatus Atcc 8482
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8q7i (Na: 2) - Pcna From Chaetomium Thermophilum in Complex with FEN1 Peptide
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8q8h (Na: 4) - Crystal Structure of Apo Beta-D-Galnacase From Niabella Aurantiaca (Structure 2)
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8qaw (Na: 2) - Medicago Truncatula HISN5 (Igpd) in Complex with Mn, Imd, Edo, Fmt, Gol and Trs
Other atoms:
Mn (16);
Cl (2);
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8qay (Na: 1) - Medicago Truncatula HISN5 (Igpd) in Complex with Mn, Fmt, Act, Cit, Edo, SO4
Other atoms:
Mn (16);
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8qby (Na: 1) - Respiratory Complex I From Paracoccus Denitrificans in MSP2N2 Nanodiscs
Other atoms:
Zn (1);
Fe (28);
Ca (4);
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8qch (Na: 1) - Human Adenosine Deaminase-Like Protein in Complex with Compound AT8001
Other atoms:
F (8);
Zn (8);
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8qcu (Na: 1) - Lysozyme Covalently Bound to Fac-[Re(Co)3-Imidazole] Complex, Incubated For 38 Weeks.
Other atoms:
Br (1);
Re (9);
Cl (5);
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8qd5 (Na: 1) - Anti SER245DHA (Psf)
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8qd6 (Na: 1) - Anti SER245DHA (Pmsf)
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8qeu (Na: 4) - Crystal Structure of Ornithine Transcarbamylase From Arabidopsis Thaliana (Atotc) in Complex with Ornithine
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8qev (Na: 1) - Crystal Structure of Ornithine Transcarbamylase From Arabidopsis Thaliana (Atotc) in Complex with Carbamoyl Phosphate
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8qg1 (Na: 2) - Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Adp-Ribose
Other atoms:
Cl (1);
Fe (12);
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8qgw (Na: 8) - Crystal Structure of Oxidized Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide
Other atoms:
Fe (12);
Cl (1);
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8qh4 (Na: 8) - Crystal Structure of Reduced Respiratory Complex I Subunits Nuoef From Aquifex Aeolicus Bound to Oxidized 3-Acetylpyridine Adenine Dinucleotide
Other atoms:
Fe (12);
K (1);
Page generated: Tue Feb 25 11:42:19 2025
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