Sodium in PDB, part 287 (files: 11441-11480),
PDB 8k7x-8oyl
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11441-11480 (PDB 8k7x-8oyl).
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8k7x (Na: 2) - Crystal Structure of GH146 Beta-L-Arabinofuranosidase BLL3HYPBA1 (Amino Acids 380-1223) in Complex with Tris
Other atoms:
Mg (1);
Zn (1);
-
8kb2 (Na: 2) - Crystal Structure of M- and C-Domains of the Shaft Pilin Lrpa From Ligilactobacillus Ruminis - Iodide Derivative
Other atoms:
I (13);
Cl (1);
-
8keb (Na: 1) - Crystal Structure of 2'-Dg-III Riboswitch with 2'-Dg
Other atoms:
Mg (2);
-
8ked (Na: 1) - Crystal Structure of 2'-Dg-III Riboswitch with Guanine
Other atoms:
Mg (4);
-
8kg4 (Na: 2) - Crystal Structure of M- and C-Domains of the Shaft Pilin Lrpa From Ligilactobacillus Ruminis - Orthorhombic Form
Other atoms:
I (11);
-
8khh (Na: 9) - Crystal Structure of 2'-Dg-III Riboswitch with Guanosine
-
8ki0 (Na: 1) - Crystal Structure of the Hemophore Hasa From Pseudomonas Protegens Pf- 5 Capturing Fe-Tetraphenylporphyrin
Other atoms:
Fe (2);
-
8kme (Na: 2) - Crystal Structure of Human Alpha-Thrombin Inhibited with SEL2770.
-
8oep (Na: 1) - Crystal Structure of the PTPN3 Pdz Domain Bound to the HPV18 E6 Oncoprotein C-Terminal Peptide
-
8ofd (Na: 1) - Crystal Structure of Beta-Conglutin From Lupinus Albus Refined to 2.81 A
Other atoms:
K (1);
-
8og2 (Na: 1) - Crystal Structure of Crebbp Histone Acetyltransferase Domain in Complex with Coenzyme A
Other atoms:
Zn (4);
-
8oio (Na: 3) - Crystal Structure of the Kelch Domain of Human KLHL12 in Complex with PLEKHA4 Peptide
Other atoms:
Cl (1);
-
8ojt (Na: 1) - Crystal Structure of the Human Igd Fab - Structure FAB2
-
8oju (Na: 2) - Crystal Structure of the Human Igd Fab - Structure FAB3
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8ok3 (Na: 1) - Structure of the C-Terminal Domain of the Bdellovibrio Bacteriovorus BD2133 Fibre
Other atoms:
Cl (2);
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8okk (Na: 3) - Crystal Structure of F2F-2020184-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
-
8okl (Na: 2) - Crystal Structure of F2F-2020185-01X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
-
8okm (Na: 1) - Crystal Structure of F2F-2020197-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (4);
Br (2);
-
8okn (Na: 3) - Crystal Structure of F2F-2020198-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
-
8old (Na: 1) - Crystal Structure of Archaeoglobus Fulgidus Afago-N Protein Representing N-L1-L2 Domains
Other atoms:
As (3);
Cl (2);
-
8olt (Na: 1) - Mitochondrial Complex I From Mus Musculus in the Active State Bound with Piericidin A
Other atoms:
Mg (1);
Fe (28);
Zn (1);
-
8om0 (Na: 5) - Structure of Oceanobacillus Iheyensis Group II Intron in the Presence of Na+, MG2+ and Intronistat B
Other atoms:
Mg (10);
-
8om1 (Na: 1) - Mitochondrial Complex I From Mus Musculus in the Active State
Other atoms:
Fe (28);
Zn (1);
Mg (1);
-
8ond (Na: 2) - Structure of the C-Terminal Domains of the Bdellovibrio Bacteriovorus BD2133 Fibre
Other atoms:
Cl (4);
-
8ot5 (Na: 4) - Crystal Structure of the Titin Domain FN3-85
Other atoms:
Cl (1);
-
8otb (Na: 1) - Clostridium Perfringens Chitinase CP4_3455
Other atoms:
Cl (2);
-
8otm (Na: 5) - Structure of Inha From Mycobacterium Tuberculosis in Complex with N- ((1-(3-Hydroxy-4-Phenoxybenzyl)-1H-1,2,3-Triazol-4-Yl)Methyl)-2-Oxo- 2H-Chromene-3-Carboxamide
-
8otu (Na: 3) - The Crystal Structure of PET44, A Petase Enzyme From Alkalilimnicola Ehrlichii
Other atoms:
Cl (3);
-
8oud (Na: 9) - Structure of the Human Neutral Amino Acid Transporter ASCT2 in Complex with Nanobody 469
-
8ov8 (Na: 1) - Crystal Structure of Ene-Reductase 1 From Black Poplar Mushroom in Complex to Nadp
-
8ovr (Na: 2) - Clostridium Perfringens Chitinase CP56_3454 Apo Form
-
8owa (Na: 1) - Sr Ca(2+)-Atpase in the E2 State Complexed with the Photoswitch- Thapsigargin Derivative Aztg-4
-
8owc (Na: 1) - Crystal Structure of Hen Egg White Lysozyme Co-Crystallized with 10 Mm TBXO4
Other atoms:
Tb (1);
Cl (7);
-
8owl (Na: 1) - Sr Ca(2+)-Atpase in the E2 State Complexed with the Photoswitch- Thapsigargin Derivative Aztg-6
-
8owm (Na: 3) - Crystal Structure of Glutamate Dehydrogenase 2 From Arabidopsis Thaliana Binding Ca, Nad and 2,2-Dihydroxyglutarate
Other atoms:
Ca (6);
-
8oy0 (Na: 4) - Atp Phosphoribosyltransferase (Hiszg Atpprt) From Acinetobacter Baumanii
-
8oyf (Na: 2) - Crystal Structure of Asbtnm in Lipidic Cubic Phase Without Substrate Bound
Other atoms:
Ni (1);
-
8oyg (Na: 2) - Crystal Structure of Asbtnm in Complex with Pantoate
Other atoms:
Cd (2);
-
8oyh (Na: 3) - X-Ray Structure of Furin (PCSK3) in Complex with Guanidinomethyl-Phac- Can-Tle-Can-6-(Aminomethyl)-3-Amino-Isoindol
Other atoms:
Cl (1);
Ca (3);
-
8oyl (Na: 1) - Coiled-Coil Domain of Human Stil, Q729L Mutant
Other atoms:
Cl (3);
Cd (2);
Page generated: Sat Aug 23 06:32:16 2025
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