Sodium in PDB, part 259 (files: 10321-10360),
PDB 7pux-7qdk
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10321-10360 (PDB 7pux-7qdk).
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7pux (Na: 1) - Structure of P97 N-D1(L198W) in Complex with Fragment TROLL2
Other atoms:
Br (1);
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7pv5 (Na: 16) - Rbd Domain of D. Melanogaster Trna (Uracil-5-)-Methyltransferase Homolog A (TRMT2A)
Other atoms:
Cl (46);
Au (4);
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7pvj (Na: 1) - Crystal Structure of Thioredoxin Reductase From Brugia Malayi in Complex with Auranofin
Other atoms:
Au (1);
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7pvs (Na: 1) - Crystal Structure of the Abl SH3 Domain V73E-A74S-S75R-G76T-D77E-G92N- Y93N-N94T-H95E Mutant in Presence of Peg 200
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7pw1 (Na: 4) - Crystal Structure of Ancestral Haloalkane Dehalogenase Anclinb-Dmba
Other atoms:
Cl (1);
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7pwn (Na: 2) - Urate Oxydase Aza-Xanthine Complex at 1000 Bars (100 Mpa) of Argon
Other atoms:
Ar (4);
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7q09 (Na: 2) - Urate Oxidase Aza-Xanthine Complex Under 1500 Bar of Argon
Other atoms:
Ar (6);
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7q0e (Na: 4) - Human Carbonic Anhydrase II in Complex with Methyl 2- (Benzenesulfonyl)-4-Chloro-5-Sulfamoylbenzoate
Other atoms:
Zn (1);
Cl (1);
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7q0t (Na: 1) - Lysozyme Soaked with V(IV)OSO4
Other atoms:
Cl (4);
V (3);
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7q0u (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Bipy
Other atoms:
Cl (5);
V (1);
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7q0v (Na: 1) - Lysozyme Soaked with V(IV)OSO4 and Phen
Other atoms:
V (4);
Cl (6);
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7q1d (Na: 3) - Acetyltrasferase(3) Type Iiia in Complex with 3-N-Methyl-Nemycin B
Other atoms:
Cl (1);
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7q1k (Na: 1) - Crystal Structure of the Native AA9A Lpmo From Thermoascus Aurantiacus
Other atoms:
Cu (1);
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7q1n (Na: 2) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2R)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-2,2- Diphenylacetamide
Other atoms:
Cl (13);
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7q1o (Na: 1) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2S)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-3,3- Diphenylpropanamide
Other atoms:
Cl (1);
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7q1p (Na: 1) - Crystal Structure of Human Butyrylcholinesterase in Complex with N- [(2R)-3-[(Cyclohexylmethyl)Amino]-2-Hydroxypropyl]-3,3- Diphenylpropanamide
Other atoms:
Cl (8);
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7q1r (Na: 1) - A De Novo Designed Homo-Dimeric Antiparallel Coiled Coil Apcc-Di
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7q36 (Na: 1) - Crystal Structure of KR2 Sodium Pump Rhodopsin Pressurized with Krypton
Other atoms:
Kr (11);
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7q3z (Na: 2) - Dna/Rna Binding Protein
Other atoms:
Zn (2);
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7q47 (Na: 2) - Endolysin From Bacteriophage ENC34, Catalytic Domain
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7q5e (Na: 1) - Crystal Structure of F2F-2020209-00X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (2);
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7q5f (Na: 1) - Crystal Structure of F2F-2020216-01X Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2.
Other atoms:
Cl (6);
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7q6q (Na: 2) - KEAP1 Compound Complex
Other atoms:
Cl (2);
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7q75 (Na: 1) - Room Temperature Structure of Rnase A at Atmospheric Pressure
Other atoms:
Cl (3);
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7q76 (Na: 1) - Room Temperature Structure of Rnase A at 22 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q77 (Na: 1) - Room Temperature Structure of Rnase A at 50 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q78 (Na: 1) - Room Temperature Structure of Rnase A at 72 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q79 (Na: 1) - Room Temperature Structure of Rnase A at 100 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q7a (Na: 1) - Room Temperature Structure of Rnase A at 120 Mpa Helium Gas Pressure in A Sapphire Capillary
Other atoms:
Cl (3);
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7q7b (Na: 1) - Room Temperature Structure of Rnase A at Atmospheric Pressure in A Sapphire Capillary After High Helium Gas Pressure Release
Other atoms:
Cl (3);
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7q80 (Na: 1) - Crystal Structure of the Methyltransferase-Ribozyme 1, No Magnesium Condition (with 1-Methyl-Adenosine)
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7q89 (Na: 8) - Olep Mutant G92W in Complex with 6DEB
Other atoms:
Fe (6);
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7q9l (Na: 1) - Transthyretin Complexed with (E)-4-(2-(Naphthalen-1-Yl)Vinyl)Benzene- 1,2-Diol
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7q9o (Na: 1) - Complex of Transthyretin with Resveratrol Exhibits Multiple Binding Modes
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7qbs (Na: 1) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, S-Adenosyl-L-Methionine, and Peptide Bound.
Other atoms:
Fe (5);
Co (1);
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7qbt (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
Other atoms:
Co (4);
Fe (20);
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7qbu (Na: 2) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Methyl-5'-Thioadenosine Bound.
Other atoms:
Fe (10);
Co (2);
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7qbv (Na: 4) - B12-Dependent Radical Sam Methyltransferase, MMP10 with [4FE-4S] Cluster, Cobalamin, and S-Adenosyl-L-Homocysteine Bound.
Other atoms:
Co (4);
Fe (20);
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7qdj (Na: 2) - Racemic Structure of Pk-10 and Pk-11
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7qdk (Na: 3) - A Trimeric De Novo Coiled-Coil Assembly: Cc-Typen-Lald
Other atoms:
Br (3);
Page generated: Sat Aug 23 06:31:12 2025
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