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Sodium in PDB, part 247 (files: 9841-9880), PDB 7nf5-7p2h

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9841-9880 (PDB 7nf5-7p2h).
  1. 7nf5 (Na: 1) - Crystal Structure of Mg-132 Covalently Bound to the Main Protease (3CLPRO/Mpro) of Sars-Cov-2 in Spacegroup C2.
    Other atoms: Cl (2);
  2. 7nfb (Na: 3) - Er-Prs*(+) (Y537S) in Complex with Genistein and Src-2 Coactivator Peptide
    Other atoms: Cl (3);
  3. 7nge (Na: 1) - Crystal Structure of L-Trp/Indoleamine 2,3-Dioxygenagse 1 (HIDO1) Complex with the Jk-Loop Refined in the Closed Conformation
    Other atoms: Cl (1); Fe (4);
  4. 7njf (Na: 1) - Hen Egg White Lysozyme (Hewl) Grown Inside Hare Serial Crystallography Chip
  5. 7nkf (Na: 1) - Hen Egg White Lysozyme (Hewl) Grown Inside (Not Centrifuged) Hare Serial Crystallography Chip.
  6. 7nmk (Na: 2) - Crystal Structure of the Heterocyclic Toxin Methyltransferase From Mycobacterium Tuberculosis with Bound Methylation Product 1- Methoxyquinolin-4(1H)-One
  7. 7now (Na: 2) - Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution
  8. 7nox (Na: 3) - Structure of Sgbp BO2743 From Bacteroides Ovatus in Complex with Mixed-Linked Gluco-Nonasaccharide
    Other atoms: Mg (2);
  9. 7noy (Na: 3) - Crystal Structure of the Heterocyclic Toxin Methyltransferase From Mycobacterium Tuberculosis in Complex with Substrate 1- Hydroxyquinolin-4(1H)-One
  10. 7npi (Na: 2) - Crystal Structure of MINDY2 (C266A) in Complex with LYS48-Linked Penta-Ubiquitin (K48-UB5)
    Other atoms: Cl (2);
  11. 7nq6 (Na: 3) - High Resolution Crystal Structure of C-Terminal Domain (Residues 715- 866) of Nucleoporin-98
    Other atoms: Cl (3);
  12. 7nqa (Na: 3) - Complex of Nucleoporin-98 and Nanobody MS98-27 Solved at 1.85A Resolution
  13. 7ntu (Na: 4) - X-Ray Structure of the Complex Between Human Alpha Thrombin and Two Duplex/Quadruplex Aptamers: NU172 and HD22_27MER
  14. 7nx0 (Na: 4) - Extracellular Tg and Egf-Like Domains of Alk
  15. 7nyj (Na: 1) - Structure of OBP1 From Varroa Destructor, Form P3<2>21
    Other atoms: Ca (2);
  16. 7nza (Na: 1) - Structure of OBP1 From Varroa Destructor, Form P2<1>
  17. 7nzj (Na: 1) - Structure of Bstrmb Apo
  18. 7o1u (Na: 4) - X-Ray Structure of Furin in Complex with the Guanylhydrazone-Based Inhibitor 1 (BEV241)
    Other atoms: Cl (1); Ca (3);
  19. 7o1w (Na: 3) - X-Ray Structure of Furin in Complex with the Guanylhydrazone-Based Inhibitor 2 (MI307) Soaked at 1 M Nacl
    Other atoms: Cl (1); Ca (3);
  20. 7o1y (Na: 2) - X-Ray Structure of Furin in Complex with the Guanylhydrazone-Based Inhibitor 2 (MI307) Soaked at 0.25 M Nacl
    Other atoms: Cl (1); Ca (3);
  21. 7o20 (Na: 2) - X-Ray Structure of Furin in Complex with the Guanylhydrazone-Based Inhibitor 3 (MI300)
    Other atoms: Cl (1); Ca (3);
  22. 7o22 (Na: 2) - X-Ray Structure of Furin in Complex with the Guanylhydrazone-Based Inhibitor 4 (MI359)
    Other atoms: Ca (3); Cl (2);
  23. 7o37 (Na: 1) - Murine Supercomplex CIII2CIV in the Assembled Locked Conformation
    Other atoms: Fe (12); Cu (3); Mg (1); Zn (1);
  24. 7o3c (Na: 1) - Murine Supercomplex CIII2CIV in the Mature Unlocked Conformation
    Other atoms: Fe (12); Zn (1); Cu (3); Mg (1);
  25. 7o3e (Na: 1) - Murine Supercomplex CIII2CIV in the Intermediate Locked Conformation
    Other atoms: Fe (8); Zn (1); Cu (3); Mg (1);
  26. 7o86 (Na: 2) - 1.73A X-Ray Crystal Structure of the Conserved C-Terminal (Cct) of Human Spak
    Other atoms: Mg (1); Ca (1);
  27. 7o9j (Na: 3) - Crystal Structure of Dyp-Type Peroxidase From Dictyostelium Discoideum in Complex with An Activated Form of Oxygen
    Other atoms: Fe (2);
  28. 7o9o (Na: 1) - Crystal Structure of the AWP3B (Adhesin-Like Wall Protein 3B) A-Domain From Candida Glabrata
    Other atoms: Cl (1);
  29. 7ob0 (Na: 1) - Structure of Rslov D2 Variant
    Other atoms: Mg (1); Ca (2);
  30. 7obz (Na: 3) - Structure of Rslov D109G
    Other atoms: Cl (13);
  31. 7ofz (Na: 1) - Nontypeable Haemophillus Influenzae Sapa in Complex with Double Stranded Rna
  32. 7og3 (Na: 2) - Ired-88
  33. 7ogj (Na: 2) - Crystal Structure of Human METTL1 in Complex with Sah
  34. 7okc (Na: 1) - Crystal Structure of Escherichia Coli Lpxa in Complex with Compound 1
    Other atoms: Cl (1);
  35. 7okw (Na: 2) - 1.62A X-Ray Crystal Structure of the Conserved C-Terminal (Cct) of Human OSR1
    Other atoms: Mg (2); Ca (1);
  36. 7ozq (Na: 6) - Crystal Structure of Archaeal L7AE Bound to Eukaryotic Kink-Loop
    Other atoms: Cl (1); Ca (3);
  37. 7p18 (Na: 1) - Crystal Structure of 3-Ketosteroid DELTA1-Dehydrogenase From Sterolibacterium Denitrificans in Complex with 1,4-Androstadiene-3, 17-Dione
  38. 7p1r (Na: 4) - Structure of Trichophyton Rubrum Kdnase in Complex with 2,3-Difluoro- Kdn
    Other atoms: F (4);
  39. 7p1s (Na: 4) - Structure of Kdnase From Trichophyton Rubrum in Complex with 2,3- Didehydro-2,3-Dideoxy-D-Glycero-D-Galacto-Nonulosonic Acid.
  40. 7p2h (Na: 2) - Dimethylated Fusion Protein of Rsl and Mussel Adhesion Peptide (Mefp) in Complex with Cucurbit[7]Uril, H3 Sheet Assembly
Page generated: Sat May 14 05:01:51 2022

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