Sodium in PDB, part 247 (files: 9841-9880),
PDB 7lcz-7lsu
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 9841-9880 (PDB 7lcz-7lsu).
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7lcz (Na: 5) - Crystal Structure of the Arm Domain From Drosophila SARM1 in Complex with Nmn
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7ld8 (Na: 1) - Crystal Structure of Putative Non-Heme Bromoperoxidase Bpoc From Mycobacterium Tuberculosis H37RV
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7ld9 (Na: 1) - Structure of Human GGT1 in Complex with Abba
Other atoms:
Cl (2);
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7lfi (Na: 2) - Model of Mhc Class Ib H2-M3 with Mouse ND1 N-Terminal Heptapeptide Refined at 1.70 Angstroms Resolution
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7lfj (Na: 1) - Model of Mhc Class Ib H2-M3 with Mouse ND1 N-Terminal Heptapeptide, Ala Mutant, Refined at 1.70 Angstroms Resolution
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7lfk (Na: 6) - Model of Mhc Class Ib H2-M3 with Mouse ND1 N-Terminal Heptapeptide, Thr Mutant, Refined at 1.60 Angstroms Resolution
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7lfm (Na: 1) - Model of Mhc Class Ib H2-M3 with Mouse ND1 N-Terminal Heptapeptide, Val Mutant, Triclinic Cell, Refined at 1.60 Angstroms Resolution
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7lfy (Na: 3) - Cryo-Em Structure of Human Cgmp-Bound Open CNGA1 Channel in Na+
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7lgd (Na: 1) - Hla-B*07:02 in Complex with Sars-Cov-2 Nucleocapsid Peptide N105-113
Other atoms:
Cl (5);
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7lgp (Na: 3) - Dape Enzyme From Shigella Flexneri
Other atoms:
Cl (15);
Zn (2);
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7lgt (Na: 4) - Hla-B*07:02 in Complex with 229E-Derived Coronavirus Nucleocapsid Peptide N75-83
Other atoms:
K (12);
Cl (9);
Zn (11);
Br (1);
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7lh8 (Na: 1) - Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Inhibitor Jj-II-131
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7lhx (Na: 1) - Human U1A Protein with F37M and F77M Mutations For Improved Phasing
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7li0 (Na: 4) - Crystal Structure of Apo Moraxella Catarrhalis Ferric Binding Protein A in An Open Conformation
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7lia (Na: 2) - 5-Ht Bound Serotonin Transporter Reconstituted in Lipid Nanodisc in Presence of Nacl in Outward Facing Conformation
Other atoms:
Cl (1);
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7lj2 (Na: 2) - Structure of Exo-L-Galactose-6-Sulfatase BUS1_11 From Bacteroides Uniformis in Complex with Neoporphyrabiose
Other atoms:
Ca (2);
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7lk8 (Na: 3) - Crystal Structure of Kpc-2 T215P Mutant
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7llp (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 1
Other atoms:
Cl (1);
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7lm5 (Na: 1) - Crystal Structure of the Zn(II)-Bound Adcaii H65A Mutant Variant of Streptococcus Pneumoniae
Other atoms:
Zn (11);
Cl (2);
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7ln8 (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Crystal Structure, Dataset 3
Other atoms:
Cl (1);
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7ln9 (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Dataset 1
Other atoms:
Cl (2);
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7lnp (Na: 10) - Structure of the Exo-Alpha-L-Galactosidase BPGH29 (D264N Mutant) From Bacteroides Plebeius in Complex with Paranitrophenyl-Alpha-L- Galactopyranoside
Other atoms:
Cl (2);
Ni (9);
Ca (4);
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7loq (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Dataset 2
Other atoms:
Cl (2);
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7lor (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Dataset 3
Other atoms:
Cl (2);
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7lp6 (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Dataset 2 (Merged)
Other atoms:
Cl (2);
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7lp9 (Na: 2) - Cryo-Em Structure of Full-Length TRPV1 at 4 Degrees Celsius
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7lpa (Na: 2) - Cryo-Em Structure of Full-Length TRPV1 with Capsaicin at 4 Degrees Celsius
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7lpf (Na: 1) - The Internal Aldimine Form of the Wild-Type Salmonella Typhimurium Tryptophan Synthase in Complex with Inhibitor N-(4'- Trifluoromethoxybenzenesulfonyl)-2-Amino-1-Ethylphosphate (F9F) at the Enzyme Alpha-Site and Sodium Ion at the Metal Coordination Site at 1.10 Angstrom Resolution
Other atoms:
F (3);
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7lpl (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Dataset 3 (Merged)
Other atoms:
Cl (2);
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7lpm (Na: 2) - X-Ray Radiation Damage Series on Lysozyme at 277K, Multi-Conformer Model, Crystal 2
Other atoms:
Cl (2);
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7lqj (Na: 2) - Crystal Structure of Leut Bound to L-Alanine
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7lqk (Na: 2) - Crystal Structure of the R375A Mutant of Leut
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7lql (Na: 2) - Crystal Structure of the R375D Mutant of Leut
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7lqy (Na: 1) - Structure of Squirrel TRPV1 in Apo State
Other atoms:
Cl (1);
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7lqz (Na: 1) - Structure of Squirrel TRPV1 in Complex with Rtx
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7lr0 (Na: 1) - Structure of Squirrel TRPV1 in Complex with Capsaicin
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7lrf (Na: 1) - Netrin-1 in Complex with Sos
Other atoms:
Cl (1);
Ca (2);
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7lsf (Na: 2) - Crystal Structure of the Human Neutralizing Antibody Fab Fragment T025 Bound to Tbev Ediii (Western Subtype)
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7lst (Na: 1) - Ruminococcus Bromii AMY12-D392A with 63-A-D-Glucosyl-Maltotriosyl- Maltotriose
Other atoms:
Ca (1);
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7lsu (Na: 1) - Ruminococcus Bromii AMY12-D392A with 63-A-D-Glucosyl-Maltotriose
Other atoms:
Ca (1);
Page generated: Wed Nov 13 13:06:39 2024
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