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Sodium in PDB, part 247 (files: 9841-9880), PDB 7gqu-7icp

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 9841-9880 (PDB 7gqu-7icp).
  1. 7gqu (Na: 1) - Crystal Structure of Werner Helicase Fragment 517-945 in Covalent Complex with N-[(E,1S)-1-Cyclopropyl-3-Methylsulfonylprop-2-Enyl]-2- (1,1-Difluoroethyl)-4-Phenoxypyrimidine-5-Carboxamide
    Other atoms: F (4); Zn (1);
  2. 7gre (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-1
    Other atoms: F (3); Cl (1);
  3. 7grf (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-2
    Other atoms: Br (2); Cl (1);
  4. 7grg (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-3
    Other atoms: Cl (5);
  5. 7grh (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-4
    Other atoms: Cl (2);
  6. 7gri (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-5
  7. 7grj (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-6
    Other atoms: Cl (2);
  8. 7grk (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-7
    Other atoms: Cl (1); F (1);
  9. 7grl (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-8
    Other atoms: Br (2); Cl (1);
  10. 7grm (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-9
    Other atoms: Cl (1);
  11. 7grn (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-10
    Other atoms: F (3);
  12. 7gro (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-11
    Other atoms: Cl (2); F (3);
  13. 7grp (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-12
    Other atoms: Cl (1);
  14. 7grq (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-13
    Other atoms: Cl (1);
  15. 7grs (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-15
  16. 7grt (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-16
  17. 7gru (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-17
    Other atoms: Cl (2);
  18. 7grv (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-18
    Other atoms: F (2); Cl (1);
  19. 7grw (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-19
    Other atoms: Cl (4);
  20. 7grx (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-20
    Other atoms: Cl (2); F (4);
  21. 7gry (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-21
    Other atoms: Cl (4);
  22. 7grz (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-22
  23. 7gs0 (Na: 2) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-23
    Other atoms: Cl (1);
  24. 7gs1 (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-24
    Other atoms: Cl (1);
  25. 7gs2 (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-25
  26. 7gs3 (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-26
  27. 7gs4 (Na: 1) - Crystal Structure of Sars-Cov-2 Main Protease in Complex with Cpd-27
    Other atoms: Cl (1);
  28. 7hi9 (Na: 1) - Pandda Analysis Group Deposition of Ground-State Model of Human Brachyury G177D Variant
  29. 7ice (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of CACL2
  30. 7icf (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of CDCL2 (0.1 Millimolar) (Four-Day Soak)
    Other atoms: Cd (2);
  31. 7icg (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of CDCL2
  32. 7ich (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of COCL2
  33. 7ici (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of CRCL3 (0.1 Millimolar)
  34. 7icj (Na: 1) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of CUCL2 (0.1 Millimolar)
    Other atoms: Cu (1);
  35. 7ick (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of MGCL2
  36. 7icl (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of MNCL2 (0.1 Millimolar)
  37. 7icm (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of MNCL2 (1.0 Millimolar)
  38. 7icn (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of NICL2
  39. 7ico (Na: 2) - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of ZNCL2
    Other atoms: Zn (2);
  40. 7icp (Na: 2) - Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed with Six Base Pairs of Dna; Soaked in the Presence of ZNCL2 (0.01 Millimolar)
    Other atoms: Zn (2);
Page generated: Tue Feb 25 11:40:36 2025

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