Sodium in PDB, part 182 (files: 7241-7280),
PDB 5x4b-5xuz
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 7241-7280 (PDB 5x4b-5xuz).
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5x4b (Na: 1) - Crystal Structure of N-Terminal G-Domain of Enga From Bacillus Subtilis
Other atoms:
Mg (2);
K (3);
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5x5g (Na: 1) - Crystal Structure of Tla-3 Extended-Spectrum Beta-Lactamase in A Complex with OP0595
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5x5p (Na: 1) - Human Serum Transferrin Bound to Ruthenium Nta
Other atoms:
Ru (4);
Fe (1);
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5x62 (Na: 1) - Crystal Structure of A Carnosine N-Methyltransferase Bound By Adohcy
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5x6s (Na: 4) - Acetyl Xylan Esterase From Aspergillus Awamori
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5x6v (Na: 1) - Crystal Structure of Human Heteroheptameric Complex
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5x7g (Na: 1) - Crystal Structure of Paenibacillus Sp. 598K Cycloisomaltooligosaccharide Glucanotransferase
Other atoms:
Ca (2);
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5x7h (Na: 1) - Crystal Structure of Paenibacillus Sp. 598K Cycloisomaltooligosaccharide Glucanotransferase Complexed with Cycloisomaltoheptaose
Other atoms:
Ca (2);
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5x8f (Na: 33) - Ternary Complex Structure of A Double Mutant I454RA456K of O- Succinylbenzoate Coa Synthetase (Mene) From Bacillus Subtilis Bound with Amp and Its Product Analogue Osb-Ncoa at 1.76 Angstrom
Other atoms:
Mg (27);
Ca (3);
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5x8g (Na: 5) - Binary Complex Structure of A Double Mutant I454RA456K of O- Succinylbenzoate Coa Synthetase (Mene) From Bacillus Subtilis Bound with Its Product Analogue Osb-Ncoa at 1.90 Angstrom
Other atoms:
Mg (9);
Ca (8);
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5x8k (Na: 10) - V158T Mutant of Thermus Thermophilus HB8 Thymidylate Kinase
Other atoms:
Cl (2);
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5x8v (Na: 4) - Y92H Mutant of Thermus Thermophilus HB8 Thymidylate Kinase
Other atoms:
Cl (2);
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5xa7 (Na: 1) - Complete Structure Factors and An Atomic Model of the Calcium Pump (SERCA1A) and Associated Phospholipids in the E1-2CA2+ Crystals
Other atoms:
Ca (2);
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5xab (Na: 1) - Complete Structure Factors and An Atomic Model of the Calcium Pump (SERCA1A) and Associated Phospholipids in the E2(Tg) Crystals
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5xao (Na: 4) - Crystal Structure of Phaeospaeria Nodrum Fructosyl Peptide Oxidase Mutant ASN56ALA in Complexes with Sodium and Chloride Ions
Other atoms:
Cl (5);
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5xar (Na: 4) - Structural Insights Into the Elevator-Like Mechanism of the Sodium/Citrate Symporter Cits
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5xas (Na: 2) - Structural Insights Into the Elevator-Like Mechanism of the Sodium/Citrate Symporter Cits
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5xat (Na: 3) - Structural Insights Into the Elevator-Like Mechanism of the Sodium/Citrate Symporter Cits
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5xc0 (Na: 2) - Crystal Structure of An Aromatic Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27
Other atoms:
Mg (2);
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5xc1 (Na: 2) - Crystal Structure of the Complex of An Aromatic Mutant (W6A) of An Alkali Thermostable GH10 Xylanase From Bacillus Sp. Ng-27 with S-1,2- Propanediol
Other atoms:
Mg (2);
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5xdf (Na: 2) - Homoserine Dehydrogenase From Thermus Thermophilus HB8 Complexed with Hse
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5xdq (Na: 4) - Bovine Heart Cytochrome C Oxidase in the Fully Oxidized State with pH 7.3 at 1.77 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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5xdx (Na: 4) - Bovine Heart Cytochrome C Oxidase in the Reduced State with pH 7.3 at 1.99 Angstrom Resolution
Other atoms:
Mg (2);
Zn (2);
Fe (4);
Cu (6);
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5xdz (Na: 2) - Crystal Structure of Zebrafish SNX25 Px Domain
Other atoms:
Cl (1);
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5xh6 (Na: 5) - Crystal Structure of the Acidaminococcus Sp. BV3L6 CPF1 Rvr Variant in Complex with Crrna and Target Dna (Tata Pam)
Other atoms:
Cl (1);
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5xh7 (Na: 5) - Crystal Structure of the Acidaminococcus Sp. BV3L6 CPF1 Rr Variant in Complex with Crrna and Target Dna (Tcca Pam)
Other atoms:
Cl (1);
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5xh8 (Na: 1) - Aspergillus Kawachii Beta-Fructofuranosidase Complexed with Glycerol
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5xh9 (Na: 1) - Aspergillus Kawachii Beta-Fructofuranosidase
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5xha (Na: 1) - Aspergillus Kawachii Beta-Fructofuranosidase Complexed with Fructose
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5xlj (Na: 1) - Crystal Structure of the Flagellar Cap Protein Flid D2-D3 Domains From Serratia Marcescens in Space Group P432
Other atoms:
Cl (5);
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5xm5 (Na: 5) - Crystal Structure of Zinc Binding Protein Zint at 1.49 Angstrom From E. Coli
Other atoms:
Zn (6);
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5xnp (Na: 2) - Crystal Structures of Human SALM5 in Complex with Human Ptpdelta
Other atoms:
Cl (12);
Ca (12);
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5xnq (Na: 3) - Crystal Structures of Human SALM5
Other atoms:
Cl (2);
Ca (4);
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5xpe (Na: 1) - Neutron Structure of the T26H Mutant of T4 Lysozyme
Other atoms:
Cl (4);
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5xpf (Na: 3) - High-Resolution X-Ray Structure of the T26H Mutant of T4 Lysozyme
Other atoms:
Cl (6);
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5xu8 (Na: 5) - Crystal Structure of Human USP2 in Complex with Ubiquitin and 6- Thioguanine
Other atoms:
Cl (5);
Zn (1);
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5xus (Na: 3) - Crystal Structure of Lachnospiraceae Bacterium ND2006 CPF1 in Complex with Crrna and Target Dna (Ttta Pam)
Other atoms:
Mg (2);
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5xut (Na: 1) - Crystal Structure of Lachnospiraceae Bacterium ND2006 CPF1 in Complex with Crrna and Target Dna (Tcta Pam)
Other atoms:
Mg (1);
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5xuu (Na: 1) - Crystal Structure of Lachnospiraceae Bacterium ND2006 CPF1 in Complex with Crrna and Target Dna (Tcca Pam)
Other atoms:
Mg (1);
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5xuz (Na: 3) - Crystal Structure of Lachnospiraceae Bacterium ND2006 CPF1 in Complex with Crrna and Target Dna (Ccca Pam)
Other atoms:
Mg (2);
Page generated: Sun Dec 15 11:39:35 2024
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