Sodium in PDB 5ihf: Salmonella Typhimurium Virg-Like (Stv) Protein

The structure of Salmonella Typhimurium Virg-Like (Stv) Protein, PDB code: 5ihf was solved by N.K.Pandey, S.Ray, M.Suar, N.S.Bhavesh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.38 / 1.58
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.960, 59.710, 63.130, 90.00, 90.00, 90.00
R / Rfree (%)	20.3 / 21.3

The binding sites of Sodium atom in the Salmonella Typhimurium Virg-Like (Stv) Protein (pdb code 5ihf). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Salmonella Typhimurium Virg-Like (Stv) Protein, PDB code: 5ihf:

Sodium binding site 1 out of 1 in the Salmonella Typhimurium Virg-Like (Stv) Protein


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Salmonella Typhimurium Virg-Like (Stv) Protein within 5.0Å range: probe atom residue distance (Å) B Occ B:Na203 b:63.4 occ:1.00 O B:HOH303 2.4 52.1 1.0 HZ2 B:LYS97 3.1 82.8 1.0 O B:HOH346 3.5 60.6 1.0 HZ3 B:LYS97 3.5 82.8 1.0 OD1 B:ASP94 3.6 30.1 1.0 NZ B:LYS97 3.7 69.0 1.0 HZ1 B:LYS97 4.0 82.8 1.0 HE2 B:PHE93 4.1 40.5 1.0 HE2 B:LYS90 4.1 51.2 1.0 HZ1 B:LYS90 4.2 45.2 1.0 O B:HOH366 4.4 48.2 1.0 HZ3 B:LYS90 4.5 45.2 1.0 CG B:ASP94 4.5 28.4 1.0 HD2 B:LYS97 4.5 56.5 1.0 NZ B:LYS90 4.6 37.7 1.0 OD2 B:ASP94 4.6 29.4 1.0 O B:HOH352 4.7 44.4 1.0 HD2 B:PHE93 4.8 34.4 1.0 CE B:LYS90 4.9 42.7 1.0 CE2 B:PHE93 4.9 33.7 1.0 CE B:LYS97 5.0 62.8 1.0

N.K.Pandey, S.Ray, M.Suar, N.S.Bhavesh. Salmonella Typhimurium Virg-Like (Stv) Protein To Be Published.