Atomistry » Sodium » PDB 4tmw-4u9k » 4u3z
Atomistry »
  Sodium »
    PDB 4tmw-4u9k »
      4u3z »

Sodium in PDB 4u3z: Apo MAP4K4 T181E Phosphomimetic Mutant

Enzymatic activity of Apo MAP4K4 T181E Phosphomimetic Mutant

All present enzymatic activity of Apo MAP4K4 T181E Phosphomimetic Mutant:
2.7.11.1;

Protein crystallography data

The structure of Apo MAP4K4 T181E Phosphomimetic Mutant, PDB code: 4u3z was solved by S.F.Harris, P.Wu, M.Coons, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.41 / 2.09
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.720, 80.900, 92.570, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 24.9

Sodium Binding Sites:

The binding sites of Sodium atom in the Apo MAP4K4 T181E Phosphomimetic Mutant (pdb code 4u3z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Apo MAP4K4 T181E Phosphomimetic Mutant, PDB code: 4u3z:

Sodium binding site 1 out of 1 in 4u3z

Go back to Sodium Binding Sites List in 4u3z
Sodium binding site 1 out of 1 in the Apo MAP4K4 T181E Phosphomimetic Mutant


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Apo MAP4K4 T181E Phosphomimetic Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na403

b:42.9
occ:1.00
OG1 A:THR84 2.6 28.6 1.0
O A:HIS79 2.6 28.7 1.0
O A:ILE82 2.7 27.8 1.0
O A:SER77 2.8 40.7 1.0
O A:HOH701 2.9 54.2 1.0
O A:HIS78 3.2 45.3 1.0
C A:HIS78 3.4 40.1 1.0
OE1 A:GLU106 3.4 47.8 1.0
C A:HIS79 3.5 31.7 1.0
N A:THR84 3.7 36.8 1.0
CB A:THR84 3.8 37.7 1.0
CA A:HIS78 3.8 42.2 1.0
C A:ILE82 3.8 31.9 1.0
C A:SER77 3.8 40.5 1.0
NZ A:LYS168 3.9 42.8 1.0
N A:HIS79 3.9 37.3 1.0
CA A:THR84 4.0 32.4 1.0
CA A:ARG80 4.2 36.7 1.0
N A:ARG80 4.2 30.5 1.0
N A:HIS78 4.3 37.8 1.0
CA A:HIS79 4.4 31.4 1.0
CG2 A:THR84 4.4 34.4 1.0
N A:ILE82 4.4 28.8 1.0
C A:ARG80 4.4 37.7 1.0
C A:ALA83 4.4 33.0 1.0
O A:ARG80 4.5 35.7 1.0
CD A:GLU106 4.6 45.4 1.0
CA A:ILE82 4.6 32.1 1.0
CA A:ALA83 4.8 36.0 1.0
N A:ALA83 4.8 31.5 1.0
CB A:ILE82 4.9 35.1 1.0
O A:HOH540 4.9 46.0 1.0

Reference:

P.Wu, H.Chen, M.Coons, T.D.Crawford, D.S.Kirkpatrick, L.Murray, C.O.Ndubaku, J.Nonomiya, V.Pham, S.Schmidt, T.Smysczek, P.Vitorino, W.Ye, S.F.Harris. Structural Plasticity and Kinase Activation in A Cohort of MAP4K4 Structures To Be Published.
Page generated: Mon Oct 7 18:32:13 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy