Sodium in PDB, part 120 (files: 4761-4800),
PDB 4ppf-4q3c
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 4761-4800 (PDB 4ppf-4q3c).
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4ppf (Na: 2) - Mycobacterium Tuberculosis Reca Citrate Bound Low Temperature Structure Iia-N
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4ppx (Na: 2) - Dna Polymerase Beta E295K with Spiroiminodihydantoin in Templating Position
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4pqh (Na: 1) - Crystal Structure of Glutathione Transferase LAMBDA1 From Populus Trichocarpa
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4pr0 (Na: 1) - Mycobacterium Tuberculosis Reca Glycerol Bound Low Temperature Structure Iic-N3
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4pr8 (Na: 1) - Urate Oxidase Azide Uric Acid Ternary Complex
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4pri (Na: 3) - Crystal Structure of TK3 Tcr-Hla-B*35:08-Hpvg Complex
Other atoms:
Cl (2);
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4psa (Na: 1) - Mycobacterium Tuberculosis Reca Glycerol Bound Low Temperature Structure Iic-N1
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4psp (Na: 3) - Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Graminearum in the Open Form
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4psr (Na: 3) - Crystal Structure of Alpha-L-Fucosidase From Fusarium Graminearum in the Open Form in Complex with L-Fucose
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4ptf (Na: 1) - Ternary Crystal Structure of Yeast Dna Polymerase Epsilon with Template G
Other atoms:
Ca (4);
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4pu5 (Na: 1) - Shewanella Oneidensis Toxin Antitoxin System Toxin Protein Hipa Bound with Amppnp and Mg
Other atoms:
Mg (2);
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4puv (Na: 1) - Urate Oxidase Di-Azide Complex
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4pv2 (Na: 4) - Crystal Structure of Potassium-Dependent Plant-Type L-Asparaginase From Phaseolus Vulgaris in Complex with K+ and Na+ Cations
Other atoms:
K (4);
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4pv3 (Na: 4) - Crystal Structure of Potassium-Dependent Plant-Type L-Asparaginase From Phaseolus Vulgaris in Complex with Na+ Cations
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4pve (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
Other atoms:
Cl (1);
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4pvh (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
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4pvj (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
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4pvk (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
Other atoms:
Cl (1);
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4pvp (Na: 2) - Crystal Structure of Malonate-Bound Human L-Asparaginase Protein
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4pvq (Na: 2) - Crystal Structure of Sulfate-Bound Human L-Asparaginase Protein
Other atoms:
I (4);
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4pvr (Na: 2) - Crystal Structure of Partially-Cleaved Human L-Asparaginase Protein in Complex with L-Aspartate
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4pvs (Na: 2) - Crystal Structure of Fully-Cleaved Human L-Asparaginase Protein in Complex with L-Aspartate
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4pwb (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
Other atoms:
Xe (2);
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4pwc (Na: 2) - Engineered Oxidase Reveals Steric Control of Oxygen Reduction
Other atoms:
Br (70);
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4pxl (Na: 2) - Structure of Zm ALDH2-3 (RF2C) in Complex with Nad
Other atoms:
Ca (1);
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4py9 (Na: 4) - Crystal Structure of An Exopolyphosphatase-Related Protein From Bacteroides Fragilis. Northeast Structural Genomics Target BFR192
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4pyi (Na: 1) - Human Apo Comt
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4pyj (Na: 1) - Human Apo-Comt, Single Domain Swap
Other atoms:
Mg (1);
Cl (1);
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4pyk (Na: 1) - Human Comt, Double Domain Swap
Other atoms:
Mg (1);
Cl (1);
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4pyq (Na: 2) - Humanized Rat Apo-Comt in Complex with A Ureido-Benzamidine
Other atoms:
Cl (1);
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4pz2 (Na: 4) - Structure of Zm ALDH2-6 (RF2F) in Complex with Nad
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4q04 (Na: 2) - Crystal Structure of URE3-Bp From Entomaeba Histolytica Without Calcium
Other atoms:
Mg (1);
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4q05 (Na: 4) - Crystal Structure of An Esterase E25
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4q1h (Na: 1) - Structure and Mechanism of A Dehydratase/Decarboxylase Enzyme Couple Involved in Polyketide Beta-Branching
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4q1j (Na: 1) - Structure and Mechanism of A Dehydratase/Decarboxylase Enzyme Couple Involved in Polyketide Beta-Branching
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4q29 (Na: 20) - Ensemble Refinement of PLU4264 Protein From Photorhabdus Luminescens
Other atoms:
Ni (40);
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4q39 (Na: 2) - Pyld in Complex with Pyrrolysine and Nadh
Other atoms:
Mg (2);
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4q3a (Na: 4) - Pyld Cocrystallized with L-Lysine-Ne-3S-Methyl-L-Ornithine and Nad+
Other atoms:
Mg (4);
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4q3b (Na: 4) - Pyld Cocrystallized with L-Lysine-Ne-D-Lysine and Nad+
Other atoms:
Mg (4);
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4q3c (Na: 4) - Pyld Cocrystallized with L-Lysine-Ne-L-Lysine and Nad+
Other atoms:
Mg (4);
Page generated: Thu Dec 28 11:20:21 2023
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