Sodium in PDB 9qyt: Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E

All present enzymatic activity of Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E:
3.1.1.101; 3.1.1.74;

The structure of Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E, PDB code: 9qyt was solved by D.Bischoff, B.Walla, R.Janowski, D.Niessing, D.Weuster-Botz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.61 / 1.64
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	97.21, 97.21, 74.67, 90, 90, 90
R / Rfree (%)	20.3 / 22.8

The binding sites of Sodium atom in the Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E (pdb code 9qyt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E, PDB code: 9qyt:

Sodium binding site 1 out of 1 in the Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E within 5.0Å range: probe atom residue distance (Å) B Occ A:Na303 b:55.2 occ:1.00 O A:HOH407 2.1 46.8 1.0 O A:HOH625 2.7 56.1 1.0 OE2 A:GLU174 3.0 47.6 1.0 OE2 A:GLU202 3.0 40.0 1.0 O A:CYS249 3.3 49.2 1.0 CB A:CYS249 3.6 46.9 1.0 CD A:GLU174 3.8 45.8 1.0 CG A:GLU174 4.0 46.2 1.0 CD A:GLU202 4.1 40.6 1.0 C A:CYS249 4.1 49.9 1.0 CA A:CYS249 4.5 42.1 1.0 O A:HOH434 4.6 35.6 1.0 SG A:CYS249 4.7 48.4 1.0 OE1 A:GLU202 4.8 36.3 1.0 OE1 A:GLU174 4.8 50.4 1.0 CB A:GLU174 4.8 42.9 1.0 CG A:GLU202 5.0 34.0 1.0

B.Walla, A.M.Dietrich, E.Brames, D.Bischoff, S.Fritzsche, K.Castiglione, R.Janowski, D.Niessing, D.Weuster-Botz. Application of A Rational Crystal Contact Engineering Strategy on A Poly(Ethylene Terephthalate)-Degrading Cutinase Bioengineering 2025.
DOI: 10.3390/BIOENGINEERING12060561