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Sodium in PDB 9lxl: Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1

Enzymatic activity of Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1

All present enzymatic activity of Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1:
3.2.1.51;

Protein crystallography data

The structure of Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1, PDB code: 9lxl was solved by S.A.Korban, V.I.Borshchevskiy, V.A.Pospelov, K.S.Bobrov, D.N.Ivanova, A.A.Kulminskaya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.44 / 2.19
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 76.757, 76.757, 225.338, 90, 90, 90
R / Rfree (%) 20.2 / 23.4

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1 (pdb code 9lxl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1, PDB code: 9lxl:

Sodium binding site 1 out of 1 in 9lxl

Go back to Sodium Binding Sites List in 9lxl
Sodium binding site 1 out of 1 in the Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na707

b:46.9
occ:1.00
O A:ASP16 2.5 59.5 1.0
O A:THR282 2.6 48.2 1.0
O A:HOH963 2.6 39.2 1.0
O A:HIS18 2.7 43.3 1.0
O A:HOH843 3.0 38.0 1.0
C A:ASP16 3.5 56.4 1.0
C A:THR282 3.6 48.3 1.0
C A:LYS17 3.7 45.2 1.0
C A:HIS18 3.8 54.7 1.0
O A:LYS17 3.8 51.5 1.0
CA A:LYS17 3.9 46.9 1.0
N A:LYS17 4.1 51.3 1.0
N A:HIS18 4.1 46.2 1.0
O A:HOH913 4.3 46.4 1.0
CA A:THR282 4.3 47.6 1.0
N A:SER283 4.6 45.4 1.0
CB A:THR282 4.6 42.6 1.0
CA A:ASP16 4.6 46.0 1.0
CA A:HIS18 4.6 47.6 1.0
N A:ILE19 4.6 49.7 1.0
CA A:SER283 4.7 43.5 1.0
CA A:ILE19 4.7 46.5 1.0
N A:ALA20 4.8 41.6 1.0

Reference:

S.A.Korban, V.I.Borshchevskiy, V.A.Pospelov, K.S.Bobrov, D.N.Ivanova, A.A.Kulminskaya. Crystal Structure of GH29 Family Alpha-L-Fucosidase From Fusarium Proliferatum LE1 To Be Published.
Page generated: Mon Aug 18 17:22:51 2025

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