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Sodium in PDB 9lnq: The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
Enzymatic activity of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
All present enzymatic activity of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du:
3.2.2.27;
3.2.2.27;
Protein crystallography data
The structure of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du, PDB code: 9lnq
was solved by
Y.Liu,
C.Zhou,
X.Zhan,
C.Fan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 24.74 / 1.74 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 48.86, 65.339, 98.979, 90, 90, 90 |
| R / Rfree (%) | 19.2 / 22.5 |
Sodium Binding Sites:
The binding sites of Sodium atom in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
(pdb code 9lnq). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du, PDB code: 9lnq:
Jump to Sodium binding site number: 1; 2; 3;
In total 3 binding sites of Sodium where determined in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du, PDB code: 9lnq:
Jump to Sodium binding site number: 1; 2; 3;
Sodium binding site 1 out of 3 in 9lnq
Go back to
Sodium Binding Sites List in 9lnq
Sodium binding site 1 out
of 3 in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du within 5.0Å range:
|
Sodium binding site 2 out of 3 in 9lnq
Go back to
Sodium Binding Sites List in 9lnq
Sodium binding site 2 out
of 3 in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du within 5.0Å range:
|
Sodium binding site 3 out of 3 in 9lnq
Go back to
Sodium Binding Sites List in 9lnq
Sodium binding site 3 out
of 3 in the The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of The Hung Bound to Dna Product Embedding 4PRIMER-OCH3-Du within 5.0Å range:
|
Reference:
C.Fan,
X.Zhan,
F.Guo,
Q.Li,
K.Lu,
X.Shan,
Y.Zhou,
M.Ren,
M.M.Greenberg,
Y.Liu,
C.Zhou.
Uridine Embedded Within Dna Is Repaired By Uracil Dna Glycosylase Via A Mechanism Distinct From That of Ribonuclease H2. J.Am.Chem.Soc. V. 147 11574 2025.
ISSN: ESSN 1520-5126
PubMed: 40130361
DOI: 10.1021/JACS.5C01436
Page generated: Mon Aug 18 17:21:58 2025
ISSN: ESSN 1520-5126
PubMed: 40130361
DOI: 10.1021/JACS.5C01436
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