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Sodium in PDB 8udf: Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7
Enzymatic activity of Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7
All present enzymatic activity of Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7:
3.4.22.69;
3.4.22.69;
Protein crystallography data
The structure of Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7, PDB code: 8udf
was solved by
F.Forouhar,
H.Liu,
A.Zack,
S.Iketani,
A.Williams,
D.R.Vaz,
D.L.Habashi,
S.J.Resnick,
A.Chavez,
D.D.Ho,
B.R.Stockwell,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 47.07 / 1.74 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 98.087, 81.861, 51.856, 90, 114.81, 90 |
| R / Rfree (%) | 16.5 / 19.4 |
Other elements in 8udf:
The structure of Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7 also contains other interesting chemical elements:
| Chlorine | (Cl) | 4 atoms |
| Fluorine | (F) | 1 atom |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7
(pdb code 8udf). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7, PDB code: 8udf:
In total only one binding site of Sodium was determined in the Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7, PDB code: 8udf:
Sodium binding site 1 out of 1 in 8udf
Go back to
Sodium Binding Sites List in 8udf
Sodium binding site 1 out
of 1 in the Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7 within 5.0Å range:
|
Reference:
H.Liu,
A.Zack,
F.Forouhar,
S.Iketani,
A.Williams,
D.R.Vaz,
D.L.Habashi,
K.Choi,
S.J.Resnick,
A.Chavez,
D.D.Ho,
B.R.Stockwell.
Development of Small Molecule Non-Covalent Coronavirus 3CL Protease Inhibitors From Dna-Encoded Chemical Library Screening To Be Published.
Page generated: Sat Feb 8 23:43:38 2025
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