Sodium in PDB, part 295 (files: 11761-11800),
PDB 8u2m-8uq9
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11761-11800 (PDB 8u2m-8uq9).
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8u2m (Na: 5) - Structure of P450BLT From Micromonospora Sp. Mw-13 in Complex with Biarylitide
Other atoms:
F (12);
Fe (3);
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8u2q (Na: 2) - Crystal Structure of Glycine--Trna Ligase Active Site Chimera From Mycobacterium Thermoresistibile/Tuberculosis (G5A Bound)
Other atoms:
Zn (1);
Cl (2);
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8u2z (Na: 1) - TRPV1 in Nanodisc Bound with DIC8-PIP2 in the Dilated State
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8u30 (Na: 1) - TRPV1 in Nanodisc Bound with DIC8-PIP2 in the Closed State
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8u36 (Na: 2) - The Crystal Structure of the Classical Binding Interface of Importin Alpha 2 and A Nuclear Localisation Signal Sequence in Frog Siadenovirus Core Protein VII
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8u3a (Na: 1) - TRPV1 in Nanodisc Bound with Pi-BR4 Bound in Conformation 1 (Monomer)
Other atoms:
Br (2);
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8u3c (Na: 1) - TRPV1 in Nanodisc Bound with Pi-BR4 Bound in Conformation 2 (Monomer)
Other atoms:
Br (2);
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8u3j (Na: 1) - TRPV1 in Nanodisc Bound with Empty Vanilloid Binding Pocket at 4C
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8u3l (Na: 1) - TRPV1 in Nanodisc Bound with Empty Vanilloid Binding Pocket at 25C
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8u3p (Na: 4) - 1.79 Angstrom Resolution Crystal Structure of Katg From Mycobacterium Tuberculosis with An Myw Cofactor After Heat Incubation For 60 Minutes
Other atoms:
Fe (4);
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8u41 (Na: 2) - Ovsa From Halomonas Utahensis, An Ovoselenol-Biosynthetic Selenoxide Synthase in Complex with Histidine
Other atoms:
Fe (2);
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8u42 (Na: 2) - Ovsa From Halomonas Utahensis, A Selenoxide Synthase Involved in Ovoselenol Biosynthesis
Other atoms:
Fe (2);
-
8u43 (Na: 1) - TRPV1 in Nanodisc Bound with PIP2-BR4
Other atoms:
Br (8);
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8u49 (Na: 1) - The Apo Crystal Structure of BLCEL9A From Glycoside Hydrolase Family 9
Other atoms:
Ca (2);
Cl (1);
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8u4a (Na: 1) - Crystal Structure of BLCEL9A From Glycoside Hydrolase Family 9 in Complex with Cellotriose
Other atoms:
Ca (2);
Cl (1);
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8u4d (Na: 1) - TRPV1 in Nanodisc Bound with Pi-BR4, Consensus Structure
Other atoms:
Br (8);
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8u4f (Na: 1) - Crystal Structure of BLCEL9A From Glycoside Hydrolase Family 9 in Complex with Cellohexaose
Other atoms:
Cl (1);
Ca (2);
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8u5r (Na: 3) - Structure of Mango II Variant Aptamer Bound to T01-6A
Other atoms:
K (12);
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8u5t (Na: 1) - Structure of Mango II Variant Aptamer Bound to T01-6A-B
Other atoms:
K (8);
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8u5z (Na: 1) - Structure of Mango II Variant Aptamer Bound to T01-7M-B
Other atoms:
K (10);
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8u8w (Na: 1) - Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Pyruvate and Halides Bound)
Other atoms:
Cl (2);
I (2);
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8u90 (Na: 1) - Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Apo, Hexagonal Form)
Other atoms:
I (2);
Cl (3);
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8u92 (Na: 6) - Crystal Structure of N-Acetylneuraminate Lyase (Nana) From Klebsiella Aerogenes (Pyruvate Bound, Orthorhombic P Form)
Other atoms:
Cl (28);
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8u9b (Na: 8) - Crystal Structure of Betaine Aldehyde Dehydrogenase (Betb) From Klebsiella Aerogenes (Apo, P21 Form)
Other atoms:
Cl (8);
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8uas (Na: 4) - Rhodococcus Ruber Alcohol Dehydrogenase Nadh Biomimetic Complex - Compound 1A
Other atoms:
Si (10);
Zn (26);
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8uat (Na: 1) - Thermus Scotoductus Sa-01 Ene-Reductase Compound 3B Complex
Other atoms:
Cl (1);
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8ubs (Na: 10) - Crystal Structure of Nrdj-1 Split Intein Fusion
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8uc4 (Na: 1) - Apo X-Ray Crystal Structure of Cyclophilin D with A Surface Entropy Reduction Mutation (K175I)
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8uc5 (Na: 2) - Apo X-Ray Crystal Structure of Cyclophilin D with A Surface Entropy Reduction Mutation (K175I)
Other atoms:
Cl (3);
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8ucg (Na: 1) - Thermophilic Rna Ligase From Palaeococcus Pacificus K92A
Other atoms:
Mg (7);
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8uch (Na: 3) - Thermophilic Rna Ligase From Palaeococcus Pacificus K92A + Atp
Other atoms:
Mg (3);
-
8udf (Na: 1) - Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor DEL_7
Other atoms:
Cl (4);
F (1);
-
8udq (Na: 1) - Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor 1
Other atoms:
F (1);
Cl (2);
-
8udy (Na: 1) - Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor 25
Other atoms:
F (1);
Cl (2);
Ca (1);
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8ue0 (Na: 2) - Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor 47
Other atoms:
Cl (3);
F (1);
-
8uea (Na: 1) - Crystal Structure of Sars-Cov-2 3CL Protease with Inhibitor 29
Other atoms:
Cl (4);
F (1);
-
8ulf (Na: 4) - Crystal Structure of Plasmodium Vivax Celtos in Complex with Antibody 7G7
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8umz (Na: 2) - Crystal Structure of Engineered Mouse Protocadherin-15 EC4-EC7 Connection
Other atoms:
Ca (10);
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8uq8 (Na: 5) - Crystal Structure of RNF168 (Ring)-UBCH5C Fused to H2A-H2B Via A 2- Residue Linker
Other atoms:
Zn (4);
Cl (21);
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8uq9 (Na: 4) - Crystal Structure of RNF168 (Ring)-UBCH5C Fused to H2A-H2B Via A 4- Residue Linker
Other atoms:
Cl (36);
Zn (4);
Page generated: Tue Feb 25 11:42:43 2025
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