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Sodium in PDB 8dq2: X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
Protein crystallography data
The structure of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7, PDB code: 8dq2
was solved by
J.J.Jung,
C.-Y.Lin,
A.K.Boal,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.11 / 1.80 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 40.107, 108.658, 44.697, 90, 90.02, 90 |
| R / Rfree (%) | 19 / 20.9 |
Other elements in 8dq2:
The structure of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7 also contains other interesting chemical elements:
| Lanthanum | (La) | 12 atoms |
Sodium Binding Sites:
The binding sites of Sodium atom in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
(pdb code 8dq2). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 4 binding sites of Sodium where determined in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7, PDB code: 8dq2:
Jump to Sodium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Sodium where determined in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7, PDB code: 8dq2:
Jump to Sodium binding site number: 1; 2; 3; 4;
Sodium binding site 1 out of 4 in 8dq2
Go back to
Sodium Binding Sites List in 8dq2
Sodium binding site 1 out
of 4 in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7 within 5.0Å range:
|
Sodium binding site 2 out of 4 in 8dq2
Go back to
Sodium Binding Sites List in 8dq2
Sodium binding site 2 out
of 4 in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7 within 5.0Å range:
|
Sodium binding site 3 out of 4 in 8dq2
Go back to
Sodium Binding Sites List in 8dq2
Sodium binding site 3 out
of 4 in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7 within 5.0Å range:
|
Sodium binding site 4 out of 4 in 8dq2
Go back to
Sodium Binding Sites List in 8dq2
Sodium binding site 4 out
of 4 in the X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of X-Ray Crystal Structure of Hansschlegelia Quercus Lanmodulin (Lanm) with Lanthanum (III) Bound at pH 7 within 5.0Å range:
|
Reference:
J.A.Mattocks,
J.J.Jung,
C.Y.Lin,
Z.Dong,
N.H.Yennawar,
E.R.Featherston,
C.S.Kang-Yun,
T.A.Hamilton,
D.M.Park,
A.K.Boal,
J.A.Cotruvo.
Enhanced Rare-Earth Separation with A Metal-Sensitive Lanmodulin Dimer Nature V. 618 87 2023.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-023-05945-5
Page generated: Mon Aug 18 13:54:01 2025
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-023-05945-5
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