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Sodium in PDB 7rm5: Microed Structure of the Human Adenosine Receptor at 2.8A

Sodium Binding Sites:

The binding sites of Sodium atom in the Microed Structure of the Human Adenosine Receptor at 2.8A (pdb code 7rm5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Microed Structure of the Human Adenosine Receptor at 2.8A, PDB code: 7rm5:

Sodium binding site 1 out of 1 in 7rm5

Go back to Sodium Binding Sites List in 7rm5
Sodium binding site 1 out of 1 in the Microed Structure of the Human Adenosine Receptor at 2.8A


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Microed Structure of the Human Adenosine Receptor at 2.8A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1206

b:44.5
occ:1.00
OG A:SER91 2.5 33.2 1.0
O A:HOH1304 2.5 31.3 1.0
OD1 A:ASP52 2.5 44.3 1.0
O A:HOH1302 2.8 30.4 1.0
CB A:SER91 3.5 29.2 1.0
CG A:ASP52 3.7 46.6 1.0
O A:LEU87 4.1 32.1 1.0
O A:ALA51 4.1 30.1 1.0
OD2 A:ASP52 4.3 38.5 1.0
C A:ALA51 4.4 35.5 1.0
O A:HOH1303 4.4 29.6 1.0
CB A:ALA51 4.4 30.3 1.0
ND2 A:ASN280 4.5 31.3 1.0
N A:ASP52 4.6 34.2 1.0
C A:LEU87 4.7 30.5 1.0
CA A:ASP52 4.7 30.9 1.0
CE2 A:PHE242 4.7 30.6 1.0
CG2 A:VAL55 4.8 33.4 1.0
CB A:ASP52 4.8 31.4 1.0
OG A:SER281 4.8 41.2 1.0
CA A:SER91 4.8 28.0 1.0
CA A:THR88 5.0 26.6 1.0

Reference:

M.W.Martynowycz, A.Shiriaeva, X.Ge, J.Hattne, B.L.Nannenga, V.Cherezov, T.Gonen. Microed Structure of the Human Adenosine Receptor Determined From A Single Nanocrystal in Lcp To Be Published.
Page generated: Mon Aug 18 11:41:49 2025

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