Sodium in PDB 7kom: High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6

The structure of High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6, PDB code: 7kom was solved by G.Minasov, L.Shuvalova, O.Kiryukhina, I.Dubrovska, M.Endres, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.60 / 0.99
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	33.046, 71.087, 106.359, 90, 90, 90
R / Rfree (%)	12 / 14.1

The binding sites of Sodium atom in the High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6 (pdb code 7kom). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6, PDB code: 7kom:

Sodium binding site 1 out of 1 in the High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na203 b:11.5 occ:0.60 OG A:SER140 2.4 6.5 0.7 O A:HOH440 2.4 25.6 1.0 O A:HOH499 2.4 25.4 1.0 O A:HOH373 2.4 15.1 1.0 O A:HOH324 2.4 17.4 1.0 O A:HOH367 2.5 18.6 1.0 CB A:SER140 3.0 6.9 0.3 CB A:SER140 3.3 5.9 0.7 OG A:SER140 3.3 8.9 0.3 O A:HOH364 3.9 18.6 0.5 OE2 A:GLU136 4.1 9.2 0.5 O A:ARG137 4.2 6.3 1.0 O A:HOH400 4.2 14.5 0.6 O A:HOH402 4.3 27.2 1.0 O A:HOH364 4.4 18.2 0.5 O A:GLU136 4.4 6.4 0.5 CA A:SER140 4.5 5.8 0.3 O A:GLU136 4.5 6.2 0.5 OE1 A:GLU136 4.5 8.6 0.5 CA A:SER140 4.6 5.1 0.7 CD A:GLU136 4.6 7.9 0.5 C A:SER140 4.8 4.9 0.7 CA A:ARG137 4.8 6.1 1.0 C A:SER140 4.9 5.1 0.3 C A:ARG137 4.9 5.7 1.0 OH A:TYR87 4.9 7.1 1.0 O A:SER140 5.0 5.5 0.7

G.Minasov, L.Shuvalova, O.Kiryukhina, I.Dubrovska, M.Endres, K.J.F.Satchell, Center For Structural Genomics Of Infectious Diseases(Csgid). High Resolution Crystal Structure of Putative Pterin Binding Protein Prur (VV2_1280) From Vibrio Vulnificus CMCP6. To Be Published.