Sodium in PDB 7ax2: Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B

The structure of Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B, PDB code: 7ax2 was solved by B.Mylemans, L.Vandebroek, T.N.Parac-Vogt, A.R.D.Voet, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.21 / 2.10
Space group	I 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	133.517, 133.517, 70.093, 90, 90, 90
R / Rfree (%)	17.8 / 20.6

The structure of Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B also contains other interesting chemical elements:

Silicon	(Si)	2 atoms
Tungsten	(W)	23 atoms

The binding sites of Sodium atom in the Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B (pdb code 7ax2). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B, PDB code: 7ax2:

Sodium binding site 1 out of 1 in the Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Computationally Designed Scone-E Protein Co- Crystallized with Sta, Form B within 5.0Å range: probe atom residue distance (Å) B Occ A:Na403 b:21.1 occ:0.50 O18 A:S5T402 2.2 26.8 0.5 O3E A:S5T402 2.3 26.8 0.5 O16E A:S5T402 2.4 26.8 0.5 O2E A:S5T402 2.4 26.8 0.5 O A:ARG247 2.7 27.8 1.0 O4 A:S5T402 3.5 26.8 0.5 C A:ARG247 3.7 25.6 1.0 W7 A:S5T402 4.0 26.8 0.5 W2E A:S5T402 4.0 26.8 0.5 W1 A:S5T402 4.0 26.8 0.5 W5E A:S5T402 4.1 26.8 0.5 O7E A:S5T402 4.1 26.8 0.5 O20 A:S5T402 4.3 26.8 0.5 CA A:PHE248 4.4 26.4 1.0 N A:ARG247 4.5 22.4 1.0 N A:PHE248 4.5 26.4 1.0 O8 A:S5T402 4.5 26.8 0.5 SI1 A:S5T402 4.5 26.8 0.5 CA A:ARG247 4.6 28.8 1.0 O A:GLY280 4.6 31.7 1.0 O10E A:S5T402 4.7 26.8 0.5 O1E A:S5T402 4.7 26.8 0.5 O15E A:S5T402 4.7 26.8 0.5 O6 A:S5T402 4.8 26.8 0.5 O7 A:S5T402 4.8 26.8 0.5 O12 A:S5T402 4.9 26.8 0.5 CB A:TRP246 4.9 24.9 1.0 O19E A:S5T402 4.9 26.8 0.5 O21 A:S5T402 4.9 26.8 0.5 CB A:ARG247 4.9 26.6 1.0

B.Mylemans, L.Vandebroek, T.N.Parac-Vogt, A.R.D.Voet. Crystal Structure of the Computationally Designed Scone-E Protein Co-Crystallized with Sta, Form B To Be Published.