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Sodium in PDB 6uxc: 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis

Protein crystallography data

The structure of 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis, PDB code: 6uxc was solved by M.L.Barta, S.Lovell, K.P.Battaile, P.S.Hefty, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.72 / 1.65
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.187, 80.187, 114.841, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 20.4

Sodium Binding Sites:

The binding sites of Sodium atom in the 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis (pdb code 6uxc). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis, PDB code: 6uxc:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in 6uxc

Go back to Sodium Binding Sites List in 6uxc
Sodium binding site 1 out of 2 in the 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na301

b:28.3
occ:1.00
O A:LEU84 2.2 32.0 1.0
O A:SER81 2.3 32.7 1.0
O A:LEU78 2.5 27.1 1.0
O A:HIS79 2.5 30.2 1.0
O A:HOH503 2.5 30.6 1.0
O A:HOH475 2.6 25.3 1.0
C A:HIS79 3.1 28.4 1.0
C A:SER81 3.4 30.2 1.0
C A:LEU84 3.4 29.5 1.0
CA A:HIS79 3.5 26.6 1.0
C A:LEU78 3.6 25.6 1.0
N A:SER81 3.7 31.9 1.0
CA A:SER81 3.9 30.1 1.0
O A:HOH497 4.0 56.3 1.0
N A:HIS79 4.0 26.2 1.0
CB A:SER81 4.1 30.3 1.0
C A:SER80 4.1 33.2 1.0
N A:SER80 4.1 30.4 1.0
O A:HOH515 4.2 47.4 1.0
CA A:LEU84 4.3 29.7 1.0
N A:LEU85 4.3 27.3 1.0
N A:LEU84 4.3 27.8 1.0
CA A:LEU85 4.4 25.0 1.0
N A:ASP82 4.5 31.0 1.0
N A:LEU86 4.5 25.0 1.0
CB A:LEU84 4.5 28.4 1.0
CA A:SER80 4.6 32.5 1.0
O A:SER80 4.7 35.8 1.0
OG A:SER81 4.7 33.2 1.0
CA A:ASP82 4.8 32.9 1.0
CA A:LEU78 4.9 24.7 1.0
CD2 A:HIS79 4.9 33.9 1.0
C A:LEU85 4.9 26.4 1.0
CB A:HIS79 4.9 27.6 1.0

Sodium binding site 2 out of 2 in 6uxc

Go back to Sodium Binding Sites List in 6uxc
Sodium binding site 2 out of 2 in the 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na301

b:23.7
occ:1.00
O B:LEU84 2.3 26.9 1.0
O B:SER81 2.3 26.6 1.0
O B:HIS79 2.3 25.6 1.0
O B:LEU78 2.5 26.3 1.0
O B:HOH491 2.5 24.2 1.0
O B:HOH512 2.6 28.2 1.0
C B:HIS79 3.1 23.6 1.0
C B:SER81 3.4 24.3 1.0
CA B:HIS79 3.5 22.5 1.0
C B:LEU84 3.5 27.2 1.0
C B:LEU78 3.5 22.6 1.0
N B:SER81 3.7 25.4 1.0
O B:HOH514 3.8 54.5 1.0
CA B:SER81 3.9 25.3 1.0
N B:HIS79 4.0 22.8 1.0
CB B:SER81 4.0 26.5 1.0
N B:SER80 4.1 25.7 1.0
C B:SER80 4.2 22.8 1.0
O B:HOH524 4.3 48.3 1.0
CA B:LEU84 4.4 25.9 1.0
N B:LEU84 4.4 25.8 1.0
N B:LEU86 4.4 22.7 1.0
N B:LEU85 4.4 23.6 1.0
CA B:LEU85 4.5 24.2 1.0
N B:ASP82 4.5 26.8 1.0
CB B:LEU84 4.5 22.7 1.0
CA B:SER80 4.6 24.6 1.0
OG B:SER81 4.7 25.1 1.0
CD2 B:HIS79 4.7 24.8 1.0
O B:SER80 4.7 26.9 1.0
CA B:ASP82 4.8 33.8 1.0
CB B:HIS79 4.8 23.5 1.0
CA B:LEU78 4.9 22.1 1.0
C B:LEU85 4.9 24.6 1.0
CB B:LEU86 4.9 23.4 1.0

Reference:

M.L.Barta, S.Lovell, K.P.Battaile, P.S.Hefty. 1.65A Resolution Structure of the Hypothetical Protein CT253 From Chlamydia Trachomatis To Be Published.
Page generated: Tue Oct 8 14:14:02 2024

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