Sodium in PDB 6uw4: Cryo-Em Structure of Human TRPV3 Determined in Lipid Nanodisc

The binding sites of Sodium atom in the Cryo-Em Structure of Human TRPV3 Determined in Lipid Nanodisc (pdb code 6uw4). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Cryo-Em Structure of Human TRPV3 Determined in Lipid Nanodisc, PDB code: 6uw4:

Sodium binding site 1 out of 1 in the Cryo-Em Structure of Human TRPV3 Determined in Lipid Nanodisc


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cryo-Em Structure of Human TRPV3 Determined in Lipid Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ A:Na806 b:19.6 occ:1.00 O C:GLY638 2.5 35.6 1.0 O A:GLY638 2.5 35.6 1.0 O B:GLY638 2.5 35.6 1.0 O D:GLY638 2.5 35.6 1.0 C C:GLY638 3.5 35.6 1.0 C B:GLY638 3.5 35.6 1.0 C A:GLY638 3.5 35.6 1.0 C D:GLY638 3.5 35.6 1.0 CA C:GLY638 3.8 35.6 1.0 CA B:GLY638 3.8 35.6 1.0 CA D:GLY638 3.8 35.6 1.0 CA A:GLY638 3.8 35.6 1.0 N C:LEU639 4.7 35.1 1.0 N B:LEU639 4.7 35.1 1.0 N A:LEU639 4.7 35.1 1.0 N D:LEU639 4.7 35.1 1.0 O C:ILE637 4.8 37.4 1.0 O B:ILE637 4.9 37.4 1.0 O D:ILE637 4.9 37.4 1.0 O A:ILE637 4.9 37.4 1.0

Z.Deng, G.Maksaev, M.Rau, Z.Xie, H.Hu, J.A.J.Fitzpatrick, P.Yuan. Gating of Human TRPV3 in A Lipid Bilayer. Nat.Struct.Mol.Biol. V. 27 635 2020.
ISSN: ESSN 1545-9985
PubMed: 32572252
DOI: 10.1038/S41594-020-0428-2