Sodium in PDB, part 163 (files: 6481-6520),
PDB 5oqw-5pol
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 6481-6520 (PDB 5oqw-5pol).
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5oqw (Na: 1) - Xiap in Complex with Small Molecule
Other atoms:
F (2);
Zn (2);
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5or7 (Na: 6) - Atomic Structure of the Murine Norovirus Protruding Domain and SCD300LF Receptor Complex
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5org (Na: 9) - Structure of the Periplasmic Binding Protein (Pbp) Occj From A. Tumefaciens B6 in Complex with Octopine.
Other atoms:
Cl (14);
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5osi (Na: 4) - Structure of Retromer VPS29-VPS35C Subunits Complexed with Ridl Harpin Loop (163-176)
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5oss (Na: 1) - Beta-Glucosidase From Thermotoga Maritima in Complex with Gluco-1H- Imidazole
Other atoms:
Cl (1);
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5ou5 (Na: 16) - Crystal Structure of Maize Chloroplastic Photosynthetic Nadp(+)- Dependent Malic Enzyme
Other atoms:
K (1);
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5ovz (Na: 7) - High Resolution Structure of the Pbp Noct in Complex with Nopaline
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5owo (Na: 1) - Human Cytoplasmic Dynein N-Terminus Dimerization Domain at 1.8 Angstrom Resolution
Other atoms:
Mg (26);
K (1);
Ca (2);
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5oxn (Na: 1) - Peptst in Complex with Dipeptide Phe-Ala
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5oxo (Na: 1) - Peptst Apo Structure
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5oxq (Na: 1) - Peptst in Complex with Hepes (300 Mm)
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5oyj (Na: 1) - Crystal Structure of Vegfr-2 Domains 4-5 in Complex with Darpin D4B
Other atoms:
As (1);
Ca (4);
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5p8w (Na: 5) - Crystal Structure of Comt in Complex with [5-(2,4-Dimethyl-1,3- Thiazol-5-Yl)-1H-Pyrazol-3-Yl]Methanamine
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5p9r (Na: 1) - Humanized Rat Comt in Complex with 5-Chloro-6-(4-Fluorophenyl)-8- Hydroxy-3H-Quinazolin-4-One
Other atoms:
F (2);
Mg (2);
Cl (3);
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5pa7 (Na: 2) - Humanized Rat Comt in Complex with 6-Bromo-3-Chloroquinolin-8-Ol
Other atoms:
Mg (1);
Br (1);
Cl (1);
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5pnx (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10128A
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5pny (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10174A
Other atoms:
Cl (2);
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5pnz (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10162A
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5po0 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10146A
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5po1 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10152A
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5po2 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10132A
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5po3 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10164A
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5po4 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10170A
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5po5 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10192A
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5po6 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10157A
Other atoms:
Br (1);
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5po7 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N11083A
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5po8 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N07808B
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5po9 (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N07950B
Other atoms:
F (6);
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5poa (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10186A
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5pob (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with E13683B
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5poc (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N11081A
Other atoms:
Br (1);
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5pod (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N07807B
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5poe (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10188A and N07807B
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5pof (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10941A
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5pog (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N11063A
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5poh (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N11029A
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5poi (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N11016A
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5poj (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10941A
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5pok (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10908A
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5pol (Na: 1) - Pandda Analysis Group Deposition -- Crystal Structure of BRD1 in Complex with N10971A
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