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Sodium in PDB 4liz: Crystal Structure of Coactosin From Entamoeba Histolytica

Protein crystallography data

The structure of Crystal Structure of Coactosin From Entamoeba Histolytica, PDB code: 4liz was solved by S.Gourinath, N.Kumar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.21 / 1.50
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 76.601, 76.601, 54.647, 90.00, 90.00, 120.00
R / Rfree (%) 16.2 / 18.8

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Coactosin From Entamoeba Histolytica (pdb code 4liz). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Coactosin From Entamoeba Histolytica, PDB code: 4liz:

Sodium binding site 1 out of 1 in 4liz

Go back to Sodium Binding Sites List in 4liz
Sodium binding site 1 out of 1 in the Crystal Structure of Coactosin From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Coactosin From Entamoeba Histolytica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na202

b:14.5
occ:1.00
O A:GLU15 2.3 13.6 1.0
O A:ASN21 2.4 16.0 1.0
O A:HOH341 2.4 21.3 1.0
O A:VAL24 2.4 13.5 1.0
O A:ASP18 2.6 14.1 1.0
O A:VAL16 3.0 14.6 1.0
C A:GLU15 3.4 12.1 1.0
C A:ASN21 3.5 16.2 1.0
C A:VAL16 3.6 12.8 1.0
C A:VAL24 3.6 13.3 1.0
C A:ASP18 3.6 13.3 1.0
CA A:VAL16 3.7 11.6 1.0
CB A:ASN21 3.9 15.1 1.0
N A:VAL16 4.1 11.9 1.0
N A:ASP18 4.1 13.9 1.0
CA A:ASN21 4.1 14.5 1.0
NH1 A:ARG66 4.2 15.0 1.0
CA A:ASP18 4.3 14.8 1.0
N A:ASN21 4.4 16.5 1.0
CD A:ARG66 4.4 18.6 1.0
CA A:VAL24 4.4 12.6 1.0
N A:VAL24 4.4 14.5 1.0
CG A:ASN21 4.5 14.9 1.0
N A:GLU22 4.5 18.4 1.0
CB A:ASP18 4.5 13.2 1.0
N A:ILE17 4.5 13.4 1.0
N A:GLU25 4.6 12.3 1.0
C A:ILE17 4.6 13.8 1.0
CB A:VAL24 4.6 12.8 1.0
N A:ASP19 4.6 16.4 1.0
CA A:GLU15 4.7 11.3 1.0
O A:HOH360 4.7 31.1 1.0
CA A:GLU22 4.7 18.6 1.0
CA A:GLU25 4.7 12.5 1.0
OD1 A:ASN21 4.8 17.3 1.0
CZ A:ARG66 4.9 16.9 1.0
CA A:ASP19 4.9 17.4 1.0
NE A:ARG66 5.0 18.9 1.0

Reference:

S.Gourinath, N.Kumar. Crystal Structure of Coactosin From Entamoeba Histolytica To Be Published.
Page generated: Mon Oct 7 16:47:57 2024

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