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Sodium in PDB, part 274 (files: 10921-10960), PDB 8bh0-8c9f

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 10921-10960 (PDB 8bh0-8c9f).
  1. 8bh0 (Na: 6) - O-Methyltransferase PLU4890 in Complex with Sah and Aq-270B
    Other atoms: Cl (3);
  2. 8bib (Na: 1) - O-Methyltransferase PLU4890 in Complex with Sah and Aq-256
    Other atoms: Cl (3);
  3. 8bic (Na: 2) - O-Methyltransferase PLU4891 in Complex with Sah
  4. 8bid (Na: 19) - O-Methyltransferase PLU4890 (Mutant H229N) in Complex with Sah and Aq- 270A
    Other atoms: Cl (4);
  5. 8bif (Na: 1) - O-Methyltransferase PLU4892 in Complex with Sah
    Other atoms: Cl (1);
  6. 8bih (Na: 2) - O-Methyltransferase PLU4890 in Complex with Sah and Aq-284B
    Other atoms: Cl (4);
  7. 8bij (Na: 2) - O-Methyltransferase PLU4894 (Mutant I88M, W91L, C97Y, S142L, G146V, Y258M, L270F, S309Y) in Complex with Sah
    Other atoms: Cl (2);
  8. 8bir (Na: 1) - O-Methyltransferase PLU4895 in Complex with Sah and Aq-256
    Other atoms: Cl (7); I (6);
  9. 8bj1 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in the Open State
  10. 8bj2 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in the Closed State
  11. 8bj3 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in Complex with Histidinol-Phosphate
  12. 8bj4 (Na: 4) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in Apo Form
  13. 8bk5 (Na: 3) - A Structure of the Truncated Lpmip with Bound Inhibitor JK095.
    Other atoms: Cl (4);
  14. 8bo8 (Na: 1) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor P17
    Other atoms: Ca (1); Zn (2); Cl (1);
  15. 8bol (Na: 1) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor P18
    Other atoms: Ca (1); Zn (2); Cl (1);
  16. 8bpy (Na: 2) - X-Ray Structure of PDE9A in Complex with Inhibitor 13A
    Other atoms: Zn (2); Mg (2);
  17. 8brd (Na: 2) - Mechanisms of Ion Selectivity and Rotor Coupling in the Bacterial Flagellar Sodium-Driven Stator Unit
  18. 8brn (Na: 1) - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex with An Alpha-Aminonaphthylmethylphosphonic Acid Inhibitor
    Other atoms: Zn (4); Fe (4); Cl (6);
  19. 8bs9 (Na: 2) - Structure of USP36 in Complex with Ubiquitin-Pa
    Other atoms: Zn (4);
  20. 8bsg (Na: 1) - Complex of Leporine Serum Albumin with Diclofenac
    Other atoms: Cl (4);
  21. 8btw (Na: 1) - Structure of D179N Blac From Mycobacterium Tuberculosis in Complex with Vaborbactam
  22. 8bty (Na: 1) - Structure of the Active Form of Scpb, the C5A-Peptidase From Streptococcus Agalactiae.
    Other atoms: Ca (1);
  23. 8bve (Na: 2) - MOEA2 From Corynebacterium Glutamicum
  24. 8bvf (Na: 2) - MOEA2 From Corynebacterium Glutamicum in Complex with Ftsz-Ctd
  25. 8bw5 (Na: 2) - X-Ray Structure of the Complex Between Human Alpha Thrombin and the Duplex/Quadruplex Aptamer M08S-1_41MER
  26. 8byj (Na: 1) - The Structures of ACE2 in Complex with Bicyclic Peptide Inhibitor
    Other atoms: Zn (2);
  27. 8byk (Na: 2) - The Structure of Madc From Clostridium Maddingley Reveals New Insights Into Class I Lanthipeptide Cyclases
    Other atoms: Zn (1); Cl (1);
  28. 8c0g (Na: 1) - Sars-Cov NSP16-NSP10 Complexed with N7-Gtp
    Other atoms: Zn (2);
  29. 8c25 (Na: 1) - Purine Nucleoside Phosphorylase in Complex with Js-375
    Other atoms: Cl (7);
  30. 8c4d (Na: 3) - N-Acetylmuramoyl-L-Alanine Amidase From Enterococcus Faecium Prophage Genome
    Other atoms: Zn (1); Cl (4);
  31. 8c4n (Na: 1) - Cdaa-Amp Complex
    Other atoms: Cl (2);
  32. 8c56 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 2'-Deoxy-5-Methylzebularine (5MZ) and 5-Methylcytosine Containing Dsdna
  33. 8c59 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 5-Bromocytosine (Converted to 5MC) and 5-Methylcytosine Containing Dsdna
  34. 8c5d (Na: 11) - Glutathione Transferase P1-1 From Mus Musculus
    Other atoms: Cl (1); Ca (4);
  35. 8c61 (Na: 2) - Structure of USP54 in Complex with LYS63-Linked Diubiquitin-Pa
    Other atoms: Zn (12); Cl (2);
  36. 8c6g (Na: 4) - Crystal Structure of Odorant Binding Protein 4 From Anopheles Gambiae (AGAMOBP4) at pH 6.5
  37. 8c6o (Na: 2) - Crystal Structure of H64F Obelin Mutant From Obelia Longissima at 2.2 Angstrom Resolution
  38. 8c75 (Na: 3) - Pbp Acca From A. Tumefaciens BO542 in Apoform 3
  39. 8c9e (Na: 3) - Priestia Megaterium Mupirocin-Sensitive Isoleucyl-Trna Synthetase 1 Complexed with An Isoleucyl-Adenylate Analogue
    Other atoms: Cl (4); Zn (1);
  40. 8c9f (Na: 4) - Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.
    Other atoms: Cl (4); Zn (1);
Page generated: Sat Aug 23 06:31:46 2025

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