Sodium in PDB, part 274 (files: 10921-10960),
PDB 8bib-8c9g
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10921-10960 (PDB 8bib-8c9g).
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8bib (Na: 1) - O-Methyltransferase PLU4890 in Complex with Sah and Aq-256
Other atoms:
Cl (3);
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8bic (Na: 2) - O-Methyltransferase PLU4891 in Complex with Sah
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8bid (Na: 19) - O-Methyltransferase PLU4890 (Mutant H229N) in Complex with Sah and Aq- 270A
Other atoms:
Cl (4);
-
8bif (Na: 1) - O-Methyltransferase PLU4892 in Complex with Sah
Other atoms:
Cl (1);
-
8bih (Na: 2) - O-Methyltransferase PLU4890 in Complex with Sah and Aq-284B
Other atoms:
Cl (4);
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8bij (Na: 2) - O-Methyltransferase PLU4894 (Mutant I88M, W91L, C97Y, S142L, G146V, Y258M, L270F, S309Y) in Complex with Sah
Other atoms:
Cl (2);
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8bir (Na: 1) - O-Methyltransferase PLU4895 in Complex with Sah and Aq-256
Other atoms:
Cl (7);
I (6);
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8bj1 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in the Open State
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8bj2 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in the Closed State
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8bj3 (Na: 2) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in Complex with Histidinol-Phosphate
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8bj4 (Na: 4) - Crystal Structure of Medicago Truncatula Histidinol-Phosphate Aminotransferase (HISN6) in Apo Form
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8bk5 (Na: 3) - A Structure of the Truncated Lpmip with Bound Inhibitor JK095.
Other atoms:
Cl (4);
-
8bo8 (Na: 1) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor P17
Other atoms:
Ca (1);
Zn (2);
Cl (1);
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8bol (Na: 1) - X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor P18
Other atoms:
Ca (1);
Zn (2);
Cl (1);
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8bpy (Na: 2) - X-Ray Structure of PDE9A in Complex with Inhibitor 13A
Other atoms:
Zn (2);
Mg (2);
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8brd (Na: 2) - Mechanisms of Ion Selectivity and Rotor Coupling in the Bacterial Flagellar Sodium-Driven Stator Unit
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8brn (Na: 1) - Crystal Structure of Red Kidney Bean Purple Acid Phosphatase in Complex with An Alpha-Aminonaphthylmethylphosphonic Acid Inhibitor
Other atoms:
Zn (4);
Fe (4);
Cl (6);
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8bs9 (Na: 2) - Structure of USP36 in Complex with Ubiquitin-Pa
Other atoms:
Zn (4);
-
8bsg (Na: 1) - Complex of Leporine Serum Albumin with Diclofenac
Other atoms:
Cl (4);
-
8btw (Na: 1) - Structure of D179N Blac From Mycobacterium Tuberculosis in Complex with Vaborbactam
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8bty (Na: 1) - Structure of the Active Form of Scpb, the C5A-Peptidase From Streptococcus Agalactiae.
Other atoms:
Ca (1);
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8bve (Na: 2) - MOEA2 From Corynebacterium Glutamicum
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8bvf (Na: 2) - MOEA2 From Corynebacterium Glutamicum in Complex with Ftsz-Ctd
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8bw5 (Na: 2) - X-Ray Structure of the Complex Between Human Alpha Thrombin and the Duplex/Quadruplex Aptamer M08S-1_41MER
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8byj (Na: 1) - The Structures of ACE2 in Complex with Bicyclic Peptide Inhibitor
Other atoms:
Zn (2);
-
8byk (Na: 2) - The Structure of Madc From Clostridium Maddingley Reveals New Insights Into Class I Lanthipeptide Cyclases
Other atoms:
Zn (1);
Cl (1);
-
8c0g (Na: 1) - Sars-Cov NSP16-NSP10 Complexed with N7-Gtp
Other atoms:
Zn (2);
-
8c25 (Na: 1) - Purine Nucleoside Phosphorylase in Complex with Js-375
Other atoms:
Cl (7);
-
8c4d (Na: 3) - N-Acetylmuramoyl-L-Alanine Amidase From Enterococcus Faecium Prophage Genome
Other atoms:
Zn (1);
Cl (4);
-
8c4n (Na: 1) - Cdaa-Amp Complex
Other atoms:
Cl (2);
-
8c56 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 2'-Deoxy-5-Methylzebularine (5MZ) and 5-Methylcytosine Containing Dsdna
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8c59 (Na: 1) - Cpg Specific M.Mpei Methyltransferase Crystallized in the Presence of 5-Bromocytosine (Converted to 5MC) and 5-Methylcytosine Containing Dsdna
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8c5d (Na: 11) - Glutathione Transferase P1-1 From Mus Musculus
Other atoms:
Cl (1);
Ca (4);
-
8c61 (Na: 2) - Structure of USP54 in Complex with LYS63-Linked Diubiquitin-Pa
Other atoms:
Zn (12);
Cl (2);
-
8c6g (Na: 4) - Crystal Structure of Odorant Binding Protein 4 From Anopheles Gambiae (AGAMOBP4) at pH 6.5
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8c6o (Na: 2) - Crystal Structure of H64F Obelin Mutant From Obelia Longissima at 2.2 Angstrom Resolution
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8c75 (Na: 3) - Pbp Acca From A. Tumefaciens BO542 in Apoform 3
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8c9e (Na: 3) - Priestia Megaterium Mupirocin-Sensitive Isoleucyl-Trna Synthetase 1 Complexed with An Isoleucyl-Adenylate Analogue
Other atoms:
Cl (4);
Zn (1);
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8c9f (Na: 4) - Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.
Other atoms:
Cl (4);
Zn (1);
-
8c9g (Na: 3) - Priestia Megaterium Mupirocin-Sensitive Isoleucyl-Trna Synthetase 1 Complexed with Mupirocin
Other atoms:
Cl (4);
Zn (2);
Page generated: Mon Dec 15 11:17:38 2025
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