Sodium in PDB, part 266 (files: 10601-10640),
PDB 7ujj-7vuw
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 10601-10640 (PDB 7ujj-7vuw).
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7ujj (Na: 5) - STX2A and Darpin Complex
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7ul0 (Na: 1) - Crystal Structure of Sars-Cov-2 Rbd in Complex with the Ridge-Binding Nab EH8 Isolated From A Nonvaccinated Pediatric Patient
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7ul2 (Na: 1) - Cryoem Structure of Inactive NTSR1 Bound to SR48692 and NB6
Other atoms:
Cl (1);
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7uld (Na: 1) - Gtp Complex of F420-Gamma Glutamyl Ligase (Cofe) From Archaeoglobus Fulgidus
Other atoms:
Mn (2);
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7ule (Na: 1) - F420-1/Gdp Complex of F420-Gamma Glutamyl Ligase (Cofe) From Archaeoglobus Fulgidus
Other atoms:
Mn (2);
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7ult (Na: 8) - Crystal Structure of Sars-Cov-2 NSP16/10 Heterodimer Apo-Form.
Other atoms:
Zn (4);
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7um2 (Na: 1) - Sars-Cov-2 Spike-Derived Peptide S417-425 K417T Mutant (Tiadynykl) Presented By Hla-A*02:01
Other atoms:
Zn (1);
Cd (1);
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7un7 (Na: 2) - Dna Polymerase Lambda in Complex with A 1NT Microhomology Substrate
Other atoms:
Ca (2);
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7uqa (Na: 1) - Crystal Structure of the Small Ultra-Red Fluorescent Protein (Smurfp)
Other atoms:
Cl (14);
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7urp (Na: 1) - Second Cohesin Module From SCA5 of Ruminococcus Bromii
Other atoms:
Ca (1);
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7usg (Na: 1) - BRD2-BD2 in Complex with MDP5
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7usi (Na: 2) - BRD2-BD1 in Complex with MDP5
Other atoms:
Cl (6);
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7uuz (Na: 1) - Structure of the Sodium/Iodide Symporter (Nis) in Complex with Perrhenate and Sodium
Other atoms:
Re (1);
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7uv0 (Na: 2) - Structure of the Sodium/Iodide Symporter (Nis) in Complex with Iodide and Sodium
Other atoms:
I (1);
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7uvs (Na: 1) - PFS230 Domain 1 Bound By LMIV230-02 Fab
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7uwv (Na: 1) - CBM74 From Ruminococcus Bromii SAS6 with Maltodecaose
Other atoms:
Ca (3);
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7uzn (Na: 1) - Crystal Structure of the First Bromodomain of Human BRD4 in Complex with Bmt-206059 Aka 2-{(3M)-3-(1,4-Dimethyl-1H-1,2,3-Triazol-5-Yl)-8- Fluoro-5-[(S)-(Oxan-4-Yl)(Phenyl)Methyl]-5H-Pyrido[3,2-B]Indol-7- Yl}Propan-2-Ol, Triply Deuterated on the 4-Methyl Group
Other atoms:
F (1);
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7v0b (Na: 1) - Crystal Structure of Halogenase Ctcp From Kitasatospora Aureofaciens in Complex with Fad
Other atoms:
Cl (4);
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7v0h (Na: 10) - Crystal Structure of Putative Glucose 1-Dehydrogenase From Burkholderia Cenocepacia in Complex with Nadp and A Potential Reaction Product
Other atoms:
Ca (8);
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7v6j (Na: 1) - Lccomt in Complex with Sam
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7v8o (Na: 1) - Crystal Structure of Cyclohexanone Monooxygenase From T. Municipale Mutant L437T Complexed with Nadp+ and Fad in Space Group of P21221
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7v8r (Na: 3) - Crystal Structure of Cyclohexanone Monooxygenase From T. Municipale Mutant L437T Complexed with Nadp+ and Fad in Space Group of C2221
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7v8s (Na: 5) - Crystal Structure of Cyclohexanone Monooxygenase From T. Municipale Mutant L437T Complexed with Nadp+ and Fad in Space Group of P1211
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7v9e (Na: 2) - Crystal Structure of A Methyl Transferase Ribozyme
Other atoms:
Ba (9);
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7vc3 (Na: 1) - Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor L97 and L-Proline at 1.97 A Resolution
Other atoms:
Cl (11);
F (1);
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7vck (Na: 66) - uc(Nmr) Solution Structures of A Hairpin Formed By Ggcctg Repeats
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7vd8 (Na: 75) - 1.96 A Structure of Human Apoferritin Obtained From Talos Arctica Microscope
Other atoms:
Zn (254);
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7vf4 (Na: 8) - Crystal Structure of VPS75 From Candida Albicans
Other atoms:
Cl (4);
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7vgo (Na: 2) - Hen Egg Lysozyme
Other atoms:
Cl (4);
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7vgp (Na: 2) - Hen Egg Lysozyme Refolded After Denaturation at Acidic pH
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7vh4 (Na: 2) - Crystal Structure of Oligoribonuclease of Escherichia Coli
Other atoms:
Mg (2);
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7vj2 (Na: 1) - Class II Photolyase Mmcpdii Oxidized to Semiquinone Tr-Sfx Studies (125 Us Time-Point)
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7vkb (Na: 1) - Crystal Structure of the A Bacterial Kinase Complex
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7vke (Na: 1) - Crystal Structure of Human CD38 Ecd in Complex with Unidab(Tm) F11A
Other atoms:
Mg (1);
Cl (1);
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7vm9 (Na: 90) - Solution uc(Nmr) Structures of Dna Minidumbbell Formed with Two Regular Ctttg Pentaloops
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7vmf (Na: 1) - Crystal Structure of Arabidopsis Thaliana HDT2
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7vo7 (Na: 1) - Crystal Structure of Trypsin in Complex with Lima Bean Trypsin Inhibitor at 2.25A Resolution.
Other atoms:
Cl (2);
Ca (2);
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7vpe (Na: 1) - Falcilysin in Complex with A1
Other atoms:
Cl (6);
Zn (1);
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7vuk (Na: 8) - Crystal Structure of the Core Region of Thermus Thermophilus MUTS2 Complexed with Adp.
Other atoms:
Cl (3);
Mg (5);
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7vuw (Na: 2) - Bovine Heart Cytochrome C Oxidase in the Cyanide-Bound Fully Oxidized State at 50 K
Other atoms:
Cu (6);
Zn (2);
Fe (4);
Mg (2);
Page generated: Tue Feb 25 11:41:21 2025
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