Sodium in PDB 8ss5: Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State)

The binding sites of Sodium atom in the Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State) (pdb code 8ss5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State), PDB code: 8ss5:

Sodium binding site 1 out of 1 in the Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1101 b:67.9 occ:1.00 OG1 B:THR617 4.6 30.0 1.0 OG1 A:THR617 5.0 15.7 1.0

S.P.Gangwar, L.Y.Yen, M.V.Yelshanskaya, A.I.Sobolevsky. Modulation of GLUA2-GAMMA5 Synaptic Complex Desensitization, Polyamine Block and Antiepileptic Perampanel Inhibition By Auxiliary Subunit Cornichon-2 Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-023-01080-X