Sodium in PDB, part 280 (files: 11161-11200),
PDB 8pfx-8ss6
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 11161-11200 (PDB 8pfx-8ss6).
-
8pfx (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with K2[RU2(D-P-Fphf)(CO3)3] in Condition B
Other atoms:
Ru (6);
F (2);
-
8pfy (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with K2[RU2(Danif)(CO3)3] in Condition B
Other atoms:
Ru (1);
Cl (1);
-
8ph7 (Na: 1) - X-Ray Structure of the Adduct Formed Upon Reaction of Lysozyme with [RU2CL(Dphf)(O2CCH3)3] in Condition A
Other atoms:
Ru (4);
-
8pkv (Na: 8) - Kelch Domain of KEAP1 in Complex with A Ortho-Dimethylbenzene Linked Cyclic Peptide 4 (Ortho-Wrcdeetgec)
Other atoms:
Cl (3);
-
8pkw (Na: 3) - Kelch Domain of KEAP1 in Complex with A Ortho-Dimethylbenzene Linked Cyclic Peptide 5 (Ortho-Wrcdeetgec)
Other atoms:
Cl (1);
-
8pkx (Na: 4) - Kelch Domain of KEAP1 in Complex with A Ortho-Dimethylbenzene Linked Cyclic Peptide 11 (Ortho-Wrcdeetgec)
Other atoms:
Cl (2);
-
8pvo (Na: 2) - Crystal Structure of Human Casein Kinase II Subunit Alpha (CK2A1) in Complex with Allosteric Compound FG5
Other atoms:
Cl (2);
-
8pyo (Na: 1) - 5 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
-
8pyp (Na: 1) - 25 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
-
8pyq (Na: 1) - 10 Micrometer Hewl Crystals Solved at Room-Temperature Using Fixed- Target Serial Crystallography.
Other atoms:
Cl (3);
-
8pz0 (Na: 5) - Intracellular Leucine Aminopeptidase of Pseudomonas Aeruginosa PA14.
Other atoms:
Cl (5);
-
8pzy (Na: 1) - Intracellular Leucine Aminopeptidase of Pseudomonas Aeruginosa PA14 - Hexameric Assembly with Manganese Bound
Other atoms:
Mn (12);
-
8q00 (Na: 2) - Tssm-Ub-Pa Complex - A Usp-Like Dub From B. Pseudomallei (193-430) Reacted with Ub-Pa
-
8q1r (Na: 1) - Mouse KEAP1 in Complex with Stapled Peptide
-
8q57 (Na: 2) - Crystal Structure of Class II Sfp Aldolase From Yersinia Aldovae (Yasqia-Zn-SO4) with Bound Sulfate Ions
Other atoms:
Zn (4);
-
8q59 (Na: 2) - Crystal Structure of Metal-Dependent Class II Sulfofructose Phosphate Aldolase From Yersinia Aldovae in Complex with Sulfofructose Phosphate (Yasqia-Zn-Sfp)
Other atoms:
Zn (2);
-
8q5z (Na: 1) - Crystal Structure of Bovine Thiosulfate Sulfurtransferase
-
8q6k (Na: 1) - Human Igd Fab in Complex with An Orthosteric Inhibitor of Phl P 7
-
8q6s (Na: 2) - A Carbohydrate Esterase Family 15 (CE15) Glucuronoyl Esterase From Phocaeicola Vulgatus Atcc 8482
-
8q7i (Na: 2) - Pcna From Chaetomium Thermophilum in Complex with FEN1 Peptide
-
8qeu (Na: 4) - Crystal Structure of Ornithine Transcarbamylase From Arabidopsis Thaliana (Atotc) in Complex with Ornithine
-
8qev (Na: 1) - Crystal Structure of Ornithine Transcarbamylase From Arabidopsis Thaliana (Atotc) in Complex with Carbamoyl Phosphate
-
8qng (Na: 1) - Crystal Structure of the E3 Ubiquitin Ligase Cbl-B with An Allosteric Inhibitor (Benzodiazepine Hts Hit Compound 1)
Other atoms:
Zn (2);
-
8qnh (Na: 1) - Crystal Structure of the E3 Ubiquitin Ligase Cbl-B with An Allosteric Inhibitor (WO2020264398 EX23)
Other atoms:
F (3);
Zn (2);
-
8qni (Na: 1) - Crystal Structure of the E3 Ubiquitin Ligase Cbl-B with An Allosteric Inhibitor (Benzodiazepine Compound 25)
Other atoms:
Zn (2);
-
8qtf (Na: 10) - Crystal Structure of A C-Terminally Truncated Version of Arabidopsis Thaliana 14-3-3 Omega in Complex with A Phosphopeptide From the Transcription Factor BZR1.
Other atoms:
Cl (1);
-
8qzg (Na: 1) - 1,3 L,D-Transpeptidase From Gluconobacter Oxydans
Other atoms:
Cl (1);
-
8sbm (Na: 1) - Crystal Structure of the Wild-Type Catalytic Atp-Binding Domain of Mtb Doss
Other atoms:
Zn (4);
-
8sgd (Na: 13) - Crystal Structure of CDC3(G) - CDC10(Delta 1-10) Heterocomplex From Saccharomyces Cerevisiae
Other atoms:
Mg (2);
-
8sgj (Na: 3) - Cryo-Em Structure of Human NCX1 in Apo Inactivated State
Other atoms:
Ca (6);
-
8si2 (Na: 2) - Cryo-Em Structure of TRPM7 in MSP2N2 Nanodisc in Apo State
-
8sjj (Na: 8) - X-Ray Structure of the Metastable SEPT14-SEPT7 Heterodimeric Coiled Coil
-
8skl (Na: 1) - PTP1B in Complex with 182
Other atoms:
F (1);
Cl (2);
-
8slx (Na: 1) - Rat TRPV2 Bound with 1 Cbd Ligand in Nanodiscs
-
8sly (Na: 1) - Rat TRPV2 Bound with 2 Cbd Ligands in Nanodiscs
-
8smh (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcggaagtggg)
-
8sng (Na: 2) - Crystal Structure of Arnb Transferase From Klebsiella Aerogenes (Lattice Translocation Disorder, P21 Form)
Other atoms:
Mg (2);
-
8sp1 (Na: 1) - Chimeric Ets-Domain of Murine Pu.1 Harboring the Corresponding Beta- Strand 3 (S3) Residues From Murine Ets-1 in Complex with D(Aataagcgiaagtggg)
-
8ss5 (Na: 1) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 (Apo State)
-
8ss6 (Na: 1) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
Other atoms:
F (12);
Page generated: Thu Dec 28 11:44:24 2023
|
