Sodium in PDB 8j0i: Aldo-Keto Reductase Kmakr

The structure of Aldo-Keto Reductase Kmakr, PDB code: 8j0i was solved by S.Y.Xu, L.Zhou, Y.Xu, Y.J.Wang, Y.G.Zheng, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	56.15 / 1.91
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	87.85, 48.321, 146.101, 90, 90.04, 90
R / Rfree (%)	20.5 / 25

The binding sites of Sodium atom in the Aldo-Keto Reductase Kmakr (pdb code 8j0i). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Aldo-Keto Reductase Kmakr, PDB code: 8j0i:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Aldo-Keto Reductase Kmakr


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Aldo-Keto Reductase Kmakr within 5.0Å range: probe atom residue distance (Å) B Occ A:Na401 b:19.7 occ:1.00 NE1 A:TRP297 3.9 13.3 1.0 NE2 A:HIS122 4.1 10.7 1.0 ND2 A:ASN157 4.2 9.0 1.0 OH A:TYR206 4.5 7.0 1.0 CZ A:TYR206 4.5 6.2 1.0 CD1 A:TRP297 4.6 13.5 1.0 CE2 A:TRP297 4.7 14.5 1.0 O A:HOH517 4.7 6.2 1.0 CE2 A:TYR206 4.8 6.2 1.0 CE1 A:HIS122 4.8 10.7 1.0 CD2 A:HIS122 4.8 10.0 1.0 CE1 A:TYR206 4.9 6.4 1.0 O A:HOH606 4.9 4.0 1.0 CZ2 A:TRP297 5.0 14.3 1.0

Sodium binding site 2 out of 2 in the Aldo-Keto Reductase Kmakr


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Aldo-Keto Reductase Kmakr within 5.0Å range: probe atom residue distance (Å) B Occ C:Na401 b:11.1 occ:1.00 NE1 C:TRP297 3.4 20.4 1.0 CZ C:TYR206 3.8 8.7 1.0 ND2 C:ASN157 3.8 11.1 1.0 OH C:TYR206 3.8 9.0 1.0 CE2 C:TYR206 3.9 8.1 1.0 NE2 C:HIS122 4.1 9.6 1.0 CD1 C:TRP297 4.2 19.0 1.0 CE1 C:TYR206 4.3 8.0 1.0 CE2 C:TRP297 4.5 18.8 1.0 O C:HOH652 4.5 14.5 1.0 CD2 C:TYR206 4.6 8.4 1.0 CG C:ASN157 4.7 10.5 1.0 OD1 C:ASN157 4.7 10.4 1.0 CD2 C:HIS122 4.7 10.0 1.0 O C:HOH510 4.7 23.3 1.0 CZ2 C:TRP297 4.8 18.7 1.0 CE1 C:HIS122 4.8 9.5 1.0 CD1 C:TYR206 4.9 8.4 1.0

S.Y.Xu, L.Zhou, Y.Xu, Y.J.Wang, Y.G.Zheng. Aldo-Keto Reductase Kmakr From Kluyveromyces Marxianus To Be Published.