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Sodium in PDB 8ilu: Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor

Protein crystallography data

The structure of Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor, PDB code: 8ilu was solved by A.Kumar, S.Jinal, S.Raman, K.Ghosh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.43 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 40.73, 49.6, 60.55, 90, 94.16, 90
R / Rfree (%) 16.4 / 22.9

Other elements in 8ilu:

The structure of Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor also contains other interesting chemical elements:

Fluorine (F) 6 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor (pdb code 8ilu). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor, PDB code: 8ilu:

Sodium binding site 1 out of 1 in 8ilu

Go back to Sodium Binding Sites List in 8ilu
Sodium binding site 1 out of 1 in the Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Mouse Galectin-3 in Complex with Small Molecule Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na303

b:50.6
occ:1.00
N A:SCN302 2.1 38.3 1.0
O A:HOH489 3.0 35.3 1.0
C A:SCN302 3.1 42.9 1.0
H9 A:Q1L301 3.6 15.3 1.0
H11 A:Q1L301 4.0 16.8 1.0
O1 A:Q1L301 4.4 15.8 1.0
C15 A:Q1L301 4.4 16.6 1.0
S A:SCN302 4.6 53.6 1.0
H3 A:Q1L301 4.6 14.0 1.0
C16 A:Q1L301 4.9 17.7 1.0
H12 A:Q1L301 4.9 17.6 1.0
C14 A:Q1L301 5.0 16.1 1.0
N5 A:Q1L301 5.0 14.8 1.0

Reference:

K.Ghosh, A.Kumar, S.Jinal, S.Raman, K.Ghosh. N/A N/A.
Page generated: Wed Oct 9 12:34:36 2024

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