Sodium in PDB 8eu1: Ancestral Petase 35_442 Mutant F93L

The structure of Ancestral Petase 35_442 Mutant F93L, PDB code: 8eu1 was solved by J.W.Saunders, R.L.Frkic, C.J.Jackson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	63.27 / 2.23
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	69.92, 148.624, 55.893, 90, 90, 90
R / Rfree (%)	24.3 / 29.4

The binding sites of Sodium atom in the Ancestral Petase 35_442 Mutant F93L (pdb code 8eu1). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Ancestral Petase 35_442 Mutant F93L, PDB code: 8eu1:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Ancestral Petase 35_442 Mutant F93L


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Ancestral Petase 35_442 Mutant F93L within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:37.5 occ:1.00 O A:HOH458 2.3 39.3 1.0 O A:PHE39 2.4 37.8 1.0 O A:HOH433 2.6 41.7 1.0 O A:ARG33 2.6 43.7 1.0 O A:ALA36 2.9 47.5 1.0 O A:HOH445 2.9 37.6 1.0 C A:PHE39 3.5 35.0 1.0 C A:ARG33 3.7 42.7 1.0 CG A:ARG33 3.8 40.5 1.0 OD1 A:ASN91 3.8 40.5 1.0 O A:HOH427 3.9 45.2 1.0 C A:ALA36 4.0 46.0 1.0 CA A:GLY40 4.1 36.0 1.0 N A:GLY40 4.3 34.0 1.0 N A:PHE39 4.3 36.4 1.0 CA A:ARG33 4.3 40.6 1.0 CB A:ALA36 4.3 44.7 1.0 CA A:PHE39 4.5 33.7 1.0 CA A:ALA36 4.6 46.6 1.0 CB A:ARG33 4.6 39.9 1.0 N A:LEU34 4.7 44.1 1.0 C A:GLY40 4.7 37.7 1.0 O A:LEU34 4.7 50.0 1.0 N A:GLY41 4.8 35.3 1.0 N A:GLY38 4.8 38.0 1.0 N A:ALA36 4.8 55.6 1.0 CA A:LEU34 4.9 44.7 1.0 C A:LEU34 5.0 48.7 1.0 CD A:ARG33 5.0 42.3 1.0

Sodium binding site 2 out of 2 in the Ancestral Petase 35_442 Mutant F93L


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Ancestral Petase 35_442 Mutant F93L within 5.0Å range: probe atom residue distance (Å) B Occ A:Na302 b:35.3 occ:1.00 O A:HOH455 2.2 33.0 1.0 O A:HOH446 2.4 38.4 1.0 O A:HIS247 2.4 35.1 1.0 O A:HOH461 2.6 32.4 1.0 O A:ASP249 2.7 42.7 1.0 O A:ILE252 2.7 35.0 1.0 C A:ASP249 3.5 41.7 1.0 C A:HIS247 3.5 35.4 1.0 C A:ILE252 3.8 33.9 1.0 CA A:SER250 3.9 38.9 1.0 N A:SER250 4.1 41.8 1.0 C A:ASP248 4.1 40.0 1.0 O A:HOH477 4.2 38.5 1.0 O A:ASP248 4.3 41.1 1.0 N A:ASP249 4.3 44.3 1.0 CA A:HIS247 4.3 33.9 1.0 C A:SER250 4.3 37.5 1.0 N A:ILE252 4.4 34.3 1.0 N A:ASP248 4.5 34.6 1.0 CA A:SER253 4.5 33.0 1.0 O A:SER250 4.5 36.2 1.0 CA A:ASP248 4.5 35.8 1.0 CA A:ASP249 4.6 43.3 1.0 N A:SER253 4.6 33.0 1.0 CB A:HIS247 4.6 32.1 1.0 CA A:ILE252 4.7 33.7 1.0 O A:SER253 4.8 32.3 1.0 C A:SER253 5.0 31.6 1.0 N A:ALA251 5.0 37.3 1.0

J.Saunders, R.L.Frkic, C.J.Jackson. Ancestral Petase 35_442 Mutant F93L To Be Published.