Sodium in PDB 8a9d: Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator.

The structure of Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator., PDB code: 8a9d was solved by J.Sandy, H.Cheruvara, H.Mikolajek, J.Sanchez-Weatherby, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	55.50 / 2.10
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	78.485, 78.485, 38.139, 90, 90, 90
R / Rfree (%)	19.4 / 24.9

The binding sites of Sodium atom in the Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator. (pdb code 8a9d). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator., PDB code: 8a9d:

Sodium binding site 1 out of 1 in the Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Multicrystal Room Temperature Structure of Lysozyme Collected Using A Double Multilayer Monochromator. within 5.0Å range: probe atom residue distance (Å) B Occ A:Na201 b:37.2 occ:1.00 OG A:SER72 2.3 46.5 1.0 O A:CYS64 2.3 32.3 1.0 O A:SER60 2.4 29.8 1.0 O A:ARG73 2.4 39.5 1.0 O A:HOH332 2.4 39.2 1.0 O A:HOH307 2.8 25.5 1.0 C A:CYS64 3.2 26.6 1.0 C A:ARG73 3.3 37.8 1.0 CB A:SER72 3.4 43.0 1.0 C A:SER60 3.6 31.4 1.0 CA A:ASN65 3.7 32.1 1.0 N A:ARG73 3.8 40.2 1.0 N A:ASN65 3.8 25.6 1.0 C A:SER72 4.0 46.9 1.0 CA A:ARG73 4.2 38.5 1.0 N A:ASN74 4.2 35.4 1.0 N A:CYS64 4.3 25.2 1.0 C A:ARG61 4.3 35.3 1.0 O A:ARG61 4.3 39.5 1.0 CA A:SER60 4.3 31.6 1.0 CA A:ASN74 4.4 30.0 1.0 CA A:SER72 4.4 44.8 1.0 CA A:CYS64 4.4 25.5 1.0 CB A:ASN65 4.4 30.2 1.0 O A:SER72 4.4 43.4 1.0 N A:ARG61 4.5 33.2 1.0 CB A:ASN74 4.6 25.2 1.0 CA A:ARG61 4.6 37.2 1.0 CB A:SER60 4.6 27.5 1.0 N A:TRP62 4.7 34.0 1.0 C A:ASN65 4.8 28.8 1.0 N A:ASP66 4.9 27.6 1.0 N A:TRP63 4.9 28.8 1.0 C A:TRP62 4.9 30.6 1.0 O A:HOH347 4.9 27.7 1.0

J.Sandy, H.Cheruvara, H.Mikolajek, J.Sanchez-Weatherby, M.A.Hough. Crystal to Structure Pipeline For Ambient Temperature, in Situ Crystallography at Beamline Vmxi. To Be Published.