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Sodium in PDB 7zwg: The Crystal Structure of RO4493940 Bound to CK2ALPHA

Enzymatic activity of The Crystal Structure of RO4493940 Bound to CK2ALPHA

All present enzymatic activity of The Crystal Structure of RO4493940 Bound to CK2ALPHA:
2.7.11.1;

Protein crystallography data

The structure of The Crystal Structure of RO4493940 Bound to CK2ALPHA, PDB code: 7zwg was solved by P.Brear, M.Hyvonen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.08 / 1.31
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.514, 45.289, 62.979, 90, 111.54, 90
R / Rfree (%) 18.8 / 20.3

Sodium Binding Sites:

The binding sites of Sodium atom in the The Crystal Structure of RO4493940 Bound to CK2ALPHA (pdb code 7zwg). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Crystal Structure of RO4493940 Bound to CK2ALPHA, PDB code: 7zwg:

Sodium binding site 1 out of 1 in 7zwg

Go back to Sodium Binding Sites List in 7zwg
Sodium binding site 1 out of 1 in the The Crystal Structure of RO4493940 Bound to CK2ALPHA


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of RO4493940 Bound to CK2ALPHA within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na404

b:30.0
occ:1.00
O A:HOH688 2.2 24.4 1.0
O A:HOH700 2.3 30.0 1.0
O A:PHE324 2.5 13.7 1.0
O A:VAL327 2.6 15.5 1.0
C A:PHE324 3.5 13.3 1.0
C A:VAL327 3.6 15.2 1.0
CB A:VAL327 4.0 15.3 1.0
N A:VAL327 4.1 14.6 1.0
CA A:VAL327 4.1 14.6 1.0
CB A:LYS329 4.1 24.1 1.0
O A:TYR325 4.2 14.8 1.0
CA A:TYR325 4.2 14.7 1.0
C A:TYR325 4.3 15.7 1.0
N A:TYR325 4.3 13.6 1.0
CB A:PHE324 4.4 13.4 1.0
CA A:PHE324 4.5 13.4 1.0
N A:LYS329 4.5 17.6 1.0
C A:VAL328 4.7 16.6 1.0
N A:VAL328 4.7 14.9 1.0
CD A:LYS329 4.7 36.1 1.0
CG1 A:VAL327 4.7 19.0 1.0
CA A:LYS329 4.9 21.2 1.0
O A:HOH568 5.0 14.9 1.0
N A:THR326 5.0 14.7 1.0

Reference:

M.Reinecke, P.Brear, L.Vornholz, B.Berger, F.Seefreid, S.Wilhelm, L.Gyenis, D.Litchfield, G.Medard, S.Muller, J.Ruland, M.Hyvonen, M.Wilhelm, B.Kuster. Chemical Proteomics Reveals the Target Landscape of 1,000 Kinase Inhibitor Tool Compounds To Be Published.
Page generated: Wed Oct 9 10:20:33 2024

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