Sodium in PDB 7ya9: FIS1 (Mitochondrial Fission 1 Protein)

Protein crystallography data

The structure of FIS1 (Mitochondrial Fission 1 Protein), PDB code: 7ya9 was solved by N.M.Duc, S.M.Bong, B.I.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.64 / 1.70
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 56.066, 56.066, 97.661, 90, 90, 90
R / Rfree (%) 18.8 / 22.2

Sodium Binding Sites:

The binding sites of Sodium atom in the FIS1 (Mitochondrial Fission 1 Protein) (pdb code 7ya9). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the FIS1 (Mitochondrial Fission 1 Protein), PDB code: 7ya9:

Sodium binding site 1 out of 1 in 7ya9

Go back to Sodium Binding Sites List in 7ya9
Sodium binding site 1 out of 1 in the FIS1 (Mitochondrial Fission 1 Protein)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of FIS1 (Mitochondrial Fission 1 Protein) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na705

b:13.8
occ:0.50
O A:HOH804 3.1 30.5 1.0
N A:VAL11 3.4 7.5 1.0
CA A:SER10 3.7 5.6 1.0
CG2 A:VAL11 3.9 21.4 1.0
CB A:SER10 4.0 6.2 1.0
C A:SER10 4.1 5.4 1.0
OE1 A:GLU12 4.1 23.4 1.0
CB A:VAL11 4.3 12.9 1.0
CA A:VAL11 4.5 10.5 1.0
O A:VAL9 4.8 7.2 1.0
N A:SER10 4.8 5.5 1.0

Reference:

N.M.Duc, S.M.Bong, B.I.Lee. Insight Into the Mitochondria-Er Tethering Revealed By the Crystal Structure of FIS1-BAP31 Complex To Be Published.
Page generated: Fri Jul 28 02:48:52 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy