Sodium in PDB 7rtm: Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8)

The binding sites of Sodium atom in the Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8) (pdb code 7rtm). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8), PDB code: 7rtm:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1102 b:50.2 occ:1.00 O A:ALA845 1.1 0.0 0.0 C A:ALA845 2.3 0.0 0.0 OG1 A:THR804 2.8 0.0 0.0 O2 A:CO31103 3.0 73.2 1.0 N A:ALA846 3.3 0.0 0.0 CA A:ALA845 3.3 0.0 0.0 CA A:ALA846 3.6 0.0 0.0 CB A:ALA845 3.6 0.0 0.0 N A:ALA845 3.7 0.0 0.0 OD1 A:ASP800 3.8 0.0 0.0 CB A:THR804 3.8 0.0 0.0 CG2 A:THR804 4.0 0.0 0.0 OD2 A:ASP800 4.0 0.0 0.0 CG A:ASP800 4.1 0.0 0.0 C A:ALA846 4.2 0.0 0.0 C A:VAL844 4.3 0.0 0.0 C A:CO31103 4.3 73.2 1.0 O A:ASP800 4.3 0.0 0.0 O A:VAL844 4.4 0.0 0.0 N A:THR847 4.5 0.0 0.0 CG2 A:THR538 4.6 0.0 0.0 OG1 A:THR847 4.7 0.0 0.0 O A:ALA846 4.7 0.0 0.0 CG1 A:VAL844 4.8 0.0 0.0 C A:ASP800 4.8 0.0 0.0 CB A:VAL844 4.9 0.0 0.0

Sodium binding site 2 out of 2 in the Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8) within 5.0Å range: probe atom residue distance (Å) B Occ B:Na1102 b:46.4 occ:1.00 O3 B:CO31103 2.7 72.0 1.0 OD2 B:ASP800 2.8 0.0 0.0 OD1 B:ASP800 3.1 0.0 0.0 CG B:ASP800 3.3 0.0 0.0 OG1 B:THR538 3.6 0.0 0.0 CB B:THR538 3.7 0.0 0.0 O B:ALA845 3.7 0.0 0.0 C B:CO31103 3.9 72.0 1.0 CG2 B:THR538 4.2 0.0 0.0 O1 B:CO31103 4.3 72.0 1.0 CD1 B:ILE601 4.5 30.0 1.0 CA B:ALA846 4.6 0.0 0.0 C B:ALA845 4.7 0.0 0.0 CG1 B:VAL844 4.7 0.0 0.0 CB B:ASP800 4.9 0.0 0.0 O2 B:CO31103 4.9 72.0 1.0

W.G.Wang, K.Tsirulnikov, H.Zhekova, G.Kayik, H.Muhammad-Khan, R.Azimov, N.Abuladze, L.Kao, D.Newman, S.Y.Noskov, Z.H.Zhou, A.Pushkin, I.Kurtz. Cryo-Em Structure of the Sodium-Driven Chloride/Bicarbonate Exchanger Ndcbe (SLC4A8) To Be Published.