Sodium in PDB 7jln: Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab

The structure of Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab, PDB code: 7jln was solved by C.Weidle, M.Pancera, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.72 / 2.57
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	69.42, 50.073, 125.171, 90, 93.1, 90
R / Rfree (%)	19.7 / 25.6

The binding sites of Sodium atom in the Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab (pdb code 7jln). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab, PDB code: 7jln:

Sodium binding site 1 out of 1 in the Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of GLVRC01 Fab in Complex with Anti-Idiotype IV9 Fab within 5.0Å range: probe atom residue distance (Å) B Occ H:Na302 b:65.2 occ:1.00 HA2 H:GLY190 2.7 91.4 1.0 CA H:GLY190 3.5 76.1 1.0 HA3 H:GLY190 3.5 91.4 1.0 HG2 H:PRO213 3.6 89.5 1.0 N H:GLY190 4.0 84.8 1.0 O H:LEU189 4.0 63.5 1.0 C H:LEU189 4.2 69.6 1.0 H H:GLY190 4.4 101.9 1.0 HB3 H:LEU189 4.5 82.8 1.0 CG H:PRO213 4.6 74.5 1.0 HB2 H:LEU189 4.6 82.8 1.0 HB2 H:PRO213 4.7 82.3 1.0 C H:GLY190 4.7 76.2 1.0 O H:GLY190 4.9 78.7 1.0 CB H:LEU189 4.9 68.9 1.0

E.Seydoux, Y.H.Wan, J.Feng, A.Wall, S.Aljedani, L.J.Homad, A.J.Maccamy, C.Weidle, M.D.Gray, L.Brumage, J.J.Taylor, M.Pancera, L.Stamatatos, A.T.Mcguire. Development of A Novel VRC01-Class Germline Targeting Immunogen Derived From Anti-Idiotypic Antibodies To Be Published.