Sodium in PDB 7egk: Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp

The binding sites of Sodium atom in the Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp (pdb code 7egk). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 3 binding sites of Sodium where determined in the Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp, PDB code: 7egk:
Jump to Sodium binding site number: 1; 2; 3;

Sodium binding site 1 out of 3 in the Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp within 5.0Å range: probe atom residue distance (Å) B Occ A:Na401 b:27.9 occ:1.00 O A:SER322 2.6 33.8 1.0 O A:PHE110 2.8 34.3 1.0 O A:ILE319 2.9 34.0 1.0 O A:ALA112 2.9 34.2 1.0 O A:GLY111 3.2 33.6 1.0 O A:ALA320 3.3 33.4 1.0 C A:GLY111 3.4 33.6 1.0 C A:ALA320 3.5 33.4 1.0 C A:PHE110 3.7 34.3 1.0 CA A:ALA320 3.7 33.4 1.0 C A:SER322 3.8 33.8 1.0 C A:ALA112 3.8 34.2 1.0 CA A:GLY111 3.8 33.6 1.0 C A:ILE319 3.9 34.0 1.0 N A:SER322 4.0 33.8 1.0 SD A:MET143 4.1 36.7 1.0 N A:ALA112 4.1 34.2 1.0 N A:GLY111 4.2 33.6 1.0 N A:ALA321 4.2 32.9 1.0 N A:ALA320 4.3 33.4 1.0 OG A:SER322 4.4 33.8 1.0 CA A:SER322 4.4 33.8 1.0 CD1 A:ILE84 4.5 33.8 1.0 C A:ALA321 4.5 32.9 1.0 CA A:ALA112 4.5 34.2 1.0 N A:VAL113 4.6 35.4 1.0 CA A:VAL113 4.6 35.4 1.0 CG2 A:VAL113 4.7 35.4 1.0 CA A:PHE110 4.8 34.3 1.0 CA A:ALA321 4.8 32.9 1.0 N A:SER323 4.8 35.1 1.0 CG A:MET143 5.0 36.7 1.0 CB A:ALA320 5.0 33.4 1.0

Sodium binding site 2 out of 3 in the Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp within 5.0Å range: probe atom residue distance (Å) B Occ C:Na401 b:28.3 occ:1.00 O C:SER322 2.6 33.3 1.0 O C:PHE110 2.8 34.4 1.0 O C:ILE319 2.9 33.4 1.0 O C:ALA112 2.9 34.3 1.0 O C:GLY111 3.2 33.6 1.0 O C:ALA320 3.2 32.9 1.0 C C:ALA320 3.4 32.9 1.0 C C:GLY111 3.4 33.6 1.0 CA C:ALA320 3.5 32.9 1.0 C C:PHE110 3.7 34.4 1.0 C C:ALA112 3.8 34.3 1.0 C C:SER322 3.8 33.3 1.0 CA C:GLY111 3.8 33.6 1.0 C C:ILE319 3.9 33.4 1.0 N C:SER322 4.0 33.3 1.0 SD C:MET143 4.1 36.1 1.0 N C:ALA112 4.1 34.3 1.0 N C:GLY111 4.2 33.6 1.0 N C:ALA320 4.2 32.9 1.0 OG C:SER322 4.2 33.3 1.0 N C:ALA321 4.2 32.8 1.0 CA C:SER322 4.4 33.3 1.0 CD1 C:ILE84 4.5 34.2 1.0 C C:ALA321 4.5 32.8 1.0 CA C:ALA112 4.5 34.3 1.0 N C:VAL113 4.6 35.3 1.0 CA C:VAL113 4.6 35.3 1.0 CB C:ALA320 4.7 32.9 1.0 CG2 C:VAL113 4.7 35.3 1.0 CA C:PHE110 4.8 34.4 1.0 CA C:ALA321 4.8 32.8 1.0 N C:SER323 4.8 35.0 1.0 CG C:MET143 5.0 36.1 1.0 CB C:SER322 5.0 33.3 1.0

Sodium binding site 3 out of 3 in the Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of Bicarbonate Transporter Complex Sbta-Sbtb Bound to Amp within 5.0Å range: probe atom residue distance (Å) B Occ E:Na401 b:27.5 occ:1.00 O E:SER322 2.6 33.3 1.0 O E:PHE110 2.8 34.6 1.0 O E:ILE319 2.9 33.9 1.0 O E:ALA112 2.9 33.9 1.0 O E:GLY111 3.2 33.8 1.0 O E:ALA320 3.2 33.3 1.0 C E:ALA320 3.4 33.3 1.0 C E:GLY111 3.4 33.8 1.0 CA E:ALA320 3.5 33.3 1.0 C E:PHE110 3.7 34.6 1.0 C E:ALA112 3.8 33.9 1.0 C E:SER322 3.8 33.3 1.0 CA E:GLY111 3.8 33.8 1.0 C E:ILE319 3.9 33.9 1.0 N E:SER322 4.0 33.3 1.0 SD E:MET143 4.1 35.9 1.0 N E:ALA112 4.1 33.9 1.0 N E:GLY111 4.2 33.8 1.0 N E:ALA320 4.2 33.3 1.0 N E:ALA321 4.2 32.6 1.0 OG E:SER322 4.3 33.3 1.0 CA E:SER322 4.4 33.3 1.0 CD1 E:ILE84 4.5 34.4 1.0 C E:ALA321 4.5 32.6 1.0 CA E:ALA112 4.5 33.9 1.0 N E:VAL113 4.6 34.8 1.0 CA E:VAL113 4.6 34.8 1.0 CB E:ALA320 4.7 33.3 1.0 CG2 E:VAL113 4.7 34.8 1.0 CA E:PHE110 4.8 34.6 1.0 CA E:ALA321 4.8 32.6 1.0 N E:SER323 4.8 34.7 1.0 CG E:MET143 5.0 35.9 1.0

S.Fang, X.Huang, X.Zhang, P.Zhang. Molecular Mechanism Underlying Transport and Allosteric Inhibition of Bicarbonate Transporter Sbta To Be Published.