Sodium in PDB 7b4l: Cryoem Structure of the Human Sodium Proton Exchanger NHA2

The binding sites of Sodium atom in the Cryoem Structure of the Human Sodium Proton Exchanger NHA2 (pdb code 7b4l). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Cryoem Structure of the Human Sodium Proton Exchanger NHA2, PDB code: 7b4l:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Cryoem Structure of the Human Sodium Proton Exchanger NHA2


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Cryoem Structure of the Human Sodium Proton Exchanger NHA2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na601 b:51.9 occ:0.50 OD2 A:ASP279 2.5 57.8 1.0 O A:GLY275 2.5 58.9 1.0 OD1 A:ASP278 2.6 58.3 1.0 O A:VAL244 3.2 51.1 1.0 CG A:ASP278 3.2 58.3 1.0 OD2 A:ASP278 3.3 58.3 1.0 C A:GLY275 3.3 58.9 1.0 CA A:GLY275 3.4 58.9 1.0 CG A:ASP279 3.4 57.8 1.0 CG1 A:VAL244 3.6 51.1 1.0 CD A:PRO246 3.7 48.0 1.0 OD1 A:ASP279 3.7 57.8 1.0 C A:VAL244 4.0 51.1 1.0 CG A:PRO246 4.3 48.0 1.0 N A:PRO246 4.3 48.0 1.0 CB A:PRO246 4.6 48.0 1.0 N A:SER276 4.6 59.1 1.0 CB A:ASP279 4.6 57.8 1.0 N A:ASP279 4.6 57.8 1.0 N A:SER245 4.7 49.2 1.0 CB A:ASP278 4.7 58.3 1.0 N A:VAL244 4.7 51.1 1.0 CA A:VAL244 4.7 51.1 1.0 O A:HOH705 4.7 49.2 1.0 CA A:SER245 4.8 49.2 1.0 CB A:VAL244 4.8 51.1 1.0 C A:SER245 4.8 49.2 1.0 N A:GLY275 4.8 58.9 1.0

Sodium binding site 2 out of 2 in the Cryoem Structure of the Human Sodium Proton Exchanger NHA2


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Cryoem Structure of the Human Sodium Proton Exchanger NHA2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Na602 b:52.0 occ:0.50 OD2 B:ASP279 2.5 58.3 1.0 O B:GLY275 2.5 59.3 1.0 OD1 B:ASP278 2.6 58.8 1.0 O B:VAL244 3.2 51.1 1.0 CG B:ASP278 3.2 58.8 1.0 OD2 B:ASP278 3.3 58.8 1.0 C B:GLY275 3.3 59.3 1.0 CA B:GLY275 3.4 59.3 1.0 CG B:ASP279 3.4 58.3 1.0 CG1 B:VAL244 3.6 51.1 1.0 CD B:PRO246 3.7 47.6 1.0 OD1 B:ASP279 3.7 58.3 1.0 C B:VAL244 4.0 51.1 1.0 CG B:PRO246 4.3 47.6 1.0 N B:PRO246 4.3 47.6 1.0 CB B:PRO246 4.6 47.6 1.0 N B:SER276 4.6 59.6 1.0 CB B:ASP279 4.6 58.3 1.0 N B:ASP279 4.6 58.3 1.0 N B:SER245 4.7 48.9 1.0 CB B:ASP278 4.7 58.8 1.0 N B:VAL244 4.7 51.1 1.0 CA B:VAL244 4.7 51.1 1.0 O B:HOH705 4.7 49.6 1.0 CA B:SER245 4.8 48.9 1.0 CB B:VAL244 4.8 51.1 1.0 C B:SER245 4.8 48.9 1.0 N B:GLY275 4.8 59.3 1.0

D.Woehlert, W.Kuhlbrandt, O.Yildiz. Cryoem Structure of the Human Sodium Proton Exchanger NHA2 To Be Published.