Sodium in PDB 7asq: Orotidine 5'-Monophosphate Decarboxylase-Domain of Human Umps in Complex with the Reaction Product Ump at 0.95 Angstrom Resolution

Enzymatic activity of Orotidine 5'-Monophosphate Decarboxylase-Domain of Human Umps in Complex with the Reaction Product Ump at 0.95 Angstrom Resolution

Protein crystallography data

Sodium Binding Sites:

Sodium binding site 1 out of 1 in 7asq

Sodium Binding Sites List in 7asq

Sodium binding site 1 out of 1 in the Orotidine 5'-Monophosphate Decarboxylase-Domain of Human Umps in Complex with the Reaction Product Ump at 0.95 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Orotidine 5'-Monophosphate Decarboxylase-Domain of Human Umps in Complex with the Reaction Product Ump at 0.95 Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Na605 b:15.9 occ:0.42 H A:ASN253 2.0 6.9 1.0 OD1 A:ASN253 2.4 7.4 1.0 HA A:ARG467 2.5 7.2 1.0 HB3 A:ALA470 2.6 8.0 1.0 O A:ARG467 2.7 6.5 1.0 N A:ASN253 2.8 5.8 1.0 HG3 A:ARG467 2.9 7.7 1.0 HA A:THR252 2.9 7.3 1.0 HB2 A:TRP471 3.1 8.4 1.0 H A:TRP471 3.2 7.6 1.0 CA A:ARG467 3.2 6.0 1.0 C A:ARG467 3.3 6.1 1.0 HG2 A:ARG467 3.3 7.7 1.0 CB A:ALA470 3.4 6.7 1.0 H A:LEU254 3.4 6.7 1.0 CG A:ASN253 3.4 6.0 1.0 CG A:ARG467 3.4 6.4 1.0 HB2 A:LEU254 3.5 7.2 1.0 N A:TRP471 3.5 6.3 1.0 N A:LEU254 3.5 5.5 1.0 C A:ASN253 3.5 5.3 1.0 HB1 A:ALA470 3.6 8.0 1.0 CA A:ASN253 3.6 5.7 1.0 CA A:THR252 3.7 6.1 1.0 C A:THR252 3.7 6.0 1.0 HE3 A:TRP471 3.8 9.2 1.0 OG1 A:THR252 3.8 6.5 1.0 CB A:ARG467 3.9 6.3 1.0 CB A:TRP471 3.9 7.0 1.0 C A:ALA470 4.0 6.2 1.0 HA A:TRP471 4.0 8.0 1.0 HB3 A:LEU254 4.1 7.2 1.0 CA A:TRP471 4.1 6.6 1.0 H A:ALA470 4.1 7.1 1.0 CB A:ASN253 4.1 5.7 1.0 CB A:LEU254 4.1 6.0 1.0 HB2 A:ALA470 4.1 8.0 1.0 CA A:ALA470 4.2 6.0 1.0 HB2 A:ARG467 4.2 7.6 1.0 O A:ASN253 4.2 6.2 1.0 O A:TYR466 4.2 6.4 1.0 CA A:LEU254 4.3 5.4 1.0 HG1 A:THR252 4.3 7.8 1.0 CB A:THR252 4.3 6.6 1.0 O A:GLU251 4.4 5.9 0.2 HB3 A:TRP471 4.4 8.4 1.0 N A:ARG467 4.4 5.9 1.0 N A:ALA470 4.4 5.9 1.0 HA A:ASN253 4.5 6.8 1.0 O A:GLU251 4.5 7.7 0.8 ND2 A:ASN253 4.5 6.7 1.0 HA A:LEU254 4.5 6.5 1.0 HD21 A:ASN253 4.6 8.1 1.0 HB3 A:ASN253 4.6 6.8 1.0 CE3 A:TRP471 4.6 7.7 1.0 HB A:THR252 4.6 7.9 1.0 N A:LYS468 4.6 6.3 0.3 N A:LYS468 4.6 6.1 0.7 HB3 A:ARG467 4.7 7.6 1.0 C A:TYR466 4.8 5.9 1.0 N A:THR252 4.8 6.3 1.0 HB2 A:ASN253 4.8 6.8 1.0 CD A:ARG467 4.8 7.3 1.0 HG12 A:ILE447 4.9 7.3 1.0 HD2 A:ARG467 4.9 8.7 1.0 O A:ALA470 4.9 6.8 1.0 O A:THR252 4.9 7.3 1.0 CG A:TRP471 5.0 7.4 1.0 C A:GLU251 5.0 6.5 0.2

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