Atomistry » Sodium » PDB 5vb8-5vwn
Atomistry »
  Sodium »
    PDB 5vb8-5vwn »
      5vb8 »
      5vbx »
      5vcl »
      5ve2 »
      5veg »
      5vev »
      5vez »
      5vf5 »
      5vfb »
      5vgy »
      5vh2 »
      5vhv »
      5vi0 »
      5vjd »
      5vje »
      5vjf »
      5vjo »
      5vlp »
      5vm5 »
      5vm6 »
      5vma »
      5voe »
      5vof »
      5voo »
      5vop »
      5vpa »
      5vp7 »
      5vpc »
      5vpd »
      5vpe »
      5vpf »
      5vql »
      5vra »
      5vrz »
      5vs3 »
      5vu0 »
      5vwn »
      5vs2 »
      5vnr »
      5vfz »

Sodium in PDB, part 179 (files: 7121-7160), PDB 5vb8-5vwn

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 7121-7160 (PDB 5vb8-5vwn).
  1. 5vb8 (Na: 1) - Crystal Structure of the Navab Voltage-Gated Sodium Channel in An Open State
  2. 5vbx (Na: 9) - Crystal Structure of Holo-[Acyl-Carrier-Protein] Synthase (Acps) From Escherichia Coli
  3. 5vcl (Na: 6) - Structure of the Qdm Peptide Bound to Qa-1A
  4. 5ve2 (Na: 12) - Crystal Structure of Enoyl-Coa Hydratase/Isomerase From Pseudoalteromonas Atlantica T6C at 2.3 A Resolution.
  5. 5veg (Na: 6) - Structure of A Short-Chain Flavodoxin Associated with A Non-Canonical Pdu Bacterial Microcompartment
    Other atoms: Cd (3);
  6. 5vev (Na: 2) - Crystal Structure of Phosphoribosylamine-Glycine Ligase From Neisseria Gonorrhoeae
  7. 5vez (Na: 3) - Dna Polymerase Beta Substrate Complex with 8-Oxog:A at the Primer Terminus and Incoming Dctp Analog
    Other atoms: Mg (1);
  8. 5vf5 (Na: 1) - Crystal Structure of the Vicilin From Solanum Melongena, Re-Refinement
    Other atoms: Cu (1);
  9. 5vfb (Na: 2) - 1.36 Angstrom Resolution Crystal Structure of Malate Synthase G From Pseudomonas Aeruginosa in Complex with Glycolic Acid.
    Other atoms: Ni (2); Cl (10);
  10. 5vfz (Na: 1) - Integrase From Mycobacterium Phage Brujita
  11. 5vgy (Na: 2) - Identification of A New Zinc Binding Chemotype By Fragment Screening
    Other atoms: Zn (1);
  12. 5vh2 (Na: 4) - Crystal Structure of Mouse Cadherin-23 EC12-13 with Engineered Mutation S1339D
    Other atoms: Ca (10);
  13. 5vhv (Na: 2) - Pseudomonas Fluorescens Alkylpurine Dna Glycosylase Alkc Bound to Dna Containing An Oxocarbenium-Intermediate Analog
  14. 5vi0 (Na: 1) - Pseudomonas Fluorescens Alkylpurine Dna Glycosylase Alkc Bound to Dna Containing An Abasic Site Analog
  15. 5vjd (Na: 4) - Class II Fructose-1,6-Bisphosphate Aldolase of Escherichia Coli with Dhap
    Other atoms: Zn (4);
  16. 5vje (Na: 4) - Class II Fructose-1,6-Bisphosphate Aldolase of Escherichia Coli with D-Glucitol 1,6-Bisphosphate
  17. 5vjf (Na: 2) - Class II Fructose-1,6-Bisphosphate Aldolase of Helicobacter Pylori with Dhap
    Other atoms: Zn (2); Ca (2);
  18. 5vjo (Na: 1) - Complex Between HYHEL10 Fab Fragment Heavy Chain Mutant I29F and Pekin Duck Egg Lysozyme Isoform I (Del-I)
    Other atoms: Cl (4);
  19. 5vlp (Na: 2) - PCSK9 Complex with Ldlr Antagonist Peptide and FAB7G7
  20. 5vm5 (Na: 7) - Engineered Tryptophan Synthase B-Subunit From Pyrococcus Furiosus, PFTRPB2B9, with Ser Bound
  21. 5vm6 (Na: 1) - The Hapten Triclocarban Bound to the Single Domain Camelid Nanobody Vhh T10
    Other atoms: Cl (3);
  22. 5vma (Na: 1) - Structure of B. Pumilus GH48 in Complex with A Cellobio-Derived Isofagomine
    Other atoms: Ca (2);
  23. 5vnr (Na: 1) - X-Ray Strucutre of Perdeuterated T4 Lysozyme Cysteine-Free Pseudo-Wild Type at Cryogenic Temperature
    Other atoms: Cl (2);
  24. 5voe (Na: 1) - Desgla-XAS195A Bound to Aptamer 11F7T
    Other atoms: F (19); Mg (2); Ca (1);
  25. 5vof (Na: 1) - Desgla-XAS195A Bound to Aptamer 11F7T and Rivaroxaban
    Other atoms: F (19); Mg (2); Ca (1); Cl (1);
  26. 5voo (Na: 6) - Methionine Synthase Folate-Binding Domain with Methyltetrahydrofolate From Thermus Thermophilus HB8
    Other atoms: Cl (2);
  27. 5vop (Na: 2) - Methionine Synthase Folate-Binding Domain From Thermus Thermophilus HB8 Native
  28. 5vp7 (Na: 2) - Crystal Structure of Human Kras G12A Mutant in Complex with Gdp
    Other atoms: Mg (2);
  29. 5vpa (Na: 1) - Transcription Factor Fosb/Jund Bzip Domain
    Other atoms: Cl (1);
  30. 5vpc (Na: 3) - Transcription Factor Fosb/Jund Bzip Domain in Its Oxidized Form, Type- II Crystal
    Other atoms: Cl (3);
  31. 5vpd (Na: 2) - Transcription Factor Fosb/Jund Bzip Domain in Its Oxidized Form, Type- III Crystal
    Other atoms: Cl (3);
  32. 5vpe (Na: 3) - Transcription Factor Fosb/Jund Bzip Domain in Complex with Cognate Dna, Type-I Crystal
    Other atoms: Cl (1);
  33. 5vpf (Na: 1) - Transcription Factor Fosb/Jund Bzip Domain in Complex with Cognate Dna, Type-II Crystal
    Other atoms: Cl (2);
  34. 5vql (Na: 1) - X-Ray Co-Structure of Nuclear Receptor Ror-Gammat Ligand Binding Domain with A Inverse Agonist and SRC2 Peptide
  35. 5vra (Na: 1) - 2.35-Angstrom in Situ Mylar Structure of Human A2A Adenosine Receptor at 100 K
  36. 5vrz (Na: 1) - Human Dna Polymerase Beta 8-Oxog:Dc Extension with Dttp After 60 S
    Other atoms: Mg (5); Cl (2);
  37. 5vs2 (Na: 2) - Human Dna Polymerase Beta Pre-Catalytic 8-Oxog:Da Extension Complex with Dttp Bound in Watson-Crick Conformation
    Other atoms: Ca (3);
  38. 5vs3 (Na: 1) - Human Dna Polymerase Beta 8-Oxog:Da Extension with Dttp After 90 S
    Other atoms: Mg (6);
  39. 5vu0 (Na: 9) - Crystal Structure of the Complex Between Afucosylated/Galactosylated Human IGG1 Fc and Fc Gamma Receptor Iiia (CD16A) with MAN5 N-Glycans
  40. 5vwn (Na: 1) - Triosephosphate Isomerases Deletion Loop 3 From Trichomonas Vaginalis
Page generated: Sun Aug 22 09:09:55 2021

Last articles

Zn in 7RRP
Zn in 7OKY
Zn in 7OL0
Zn in 7OKX
Zn in 7ONB
Zn in 7RSF
Zn in 7OUF
Zn in 7OUG
Zn in 7OUH
Zn in 7RGN
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy