Sodium in PDB 6uzs: Hla-B*15:01 Complexed with A Synthetic Peptide

The structure of Hla-B*15:01 Complexed with A Synthetic Peptide, PDB code: 6uzs was solved by R.J.Schutte, D.Li, D.A.Ostrov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.18 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.805, 81.532, 108.951, 90.00, 90.00, 90.00
R / Rfree (%)	17.2 / 22.3

The binding sites of Sodium atom in the Hla-B*15:01 Complexed with A Synthetic Peptide (pdb code 6uzs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Hla-B*15:01 Complexed with A Synthetic Peptide, PDB code: 6uzs:

Sodium binding site 1 out of 1 in the Hla-B*15:01 Complexed with A Synthetic Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Hla-B*15:01 Complexed with A Synthetic Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Na312 b:49.3 occ:1.00 O A:HOH608 2.3 37.5 1.0 O A:HOH611 2.5 36.9 1.0 OE1 A:GLU264 3.0 38.7 1.0 O A:HOH576 3.2 43.3 1.0 CD A:GLU264 3.9 40.8 1.0 CE1 A:HIS3 3.9 21.4 1.0 C A:GLN180 4.0 17.9 1.0 CA A:GLN180 4.0 18.2 1.0 O A:LEU179 4.0 18.5 1.0 OE2 A:GLU264 4.1 33.8 1.0 O A:GLN180 4.2 20.3 1.0 O A:HOH621 4.2 37.2 1.0 N A:ARG181 4.4 17.1 1.0 NE2 A:HIS3 4.5 21.7 1.0 O A:HOH554 4.5 37.1 1.0 N A:ALA182 4.6 14.5 1.0 N A:GLY1 4.6 41.4 1.0 CB A:ALA182 4.7 20.5 1.0 C A:ARG181 4.7 16.8 1.0 CB A:GLN180 4.9 18.6 1.0 C A:LEU179 4.9 19.6 1.0 N A:GLN180 4.9 16.4 1.0 O A:HOH495 5.0 22.0 1.0 ND1 A:HIS3 5.0 20.4 1.0

R.J.Schutte, D.Li, D.A.Ostrov. Hla-B*15:02 Complexed with A Synthetic Peptide To Be Published.