Sodium in PDB 6uzp: Hla-B*15:01 Complexed with A Synthetic Peptide

The structure of Hla-B*15:01 Complexed with A Synthetic Peptide, PDB code: 6uzp was solved by R.J.Schutte, D.Li, D.A.Ostrov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.69 / 2.08
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.957, 81.674, 109.611, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 24.8

The binding sites of Sodium atom in the Hla-B*15:01 Complexed with A Synthetic Peptide (pdb code 6uzp). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Hla-B*15:01 Complexed with A Synthetic Peptide, PDB code: 6uzp:

Sodium binding site 1 out of 1 in the Hla-B*15:01 Complexed with A Synthetic Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Hla-B*15:01 Complexed with A Synthetic Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Na102 b:49.0 occ:1.00 O B:LEU87 2.3 47.9 1.0 O B:HOH236 2.3 46.4 1.0 OD1 B:ASN83 2.8 45.0 1.0 O B:HIS84 2.9 37.4 1.0 C B:LEU87 3.5 51.9 1.0 CG B:ASN83 3.7 45.2 1.0 C B:HIS84 3.7 44.1 1.0 ND2 B:ASN83 4.0 53.9 1.0 N B:LEU87 4.0 41.8 1.0 CA B:LEU87 4.1 42.9 1.0 O B:SER88 4.1 61.1 1.0 CA B:VAL85 4.2 37.9 1.0 O B:VAL85 4.2 45.1 1.0 CB B:LEU87 4.2 42.4 1.0 C B:VAL85 4.3 40.2 1.0 N B:HIS84 4.3 36.4 1.0 N B:VAL85 4.3 38.9 1.0 C B:SER88 4.5 57.4 1.0 N B:SER88 4.6 55.2 1.0 CA B:HIS84 4.7 37.8 1.0 CA B:SER88 4.9 51.0 1.0

R.J.Schutte, D.Li, D.A.Ostrov. Hla-B*15:01 Complexed with A Synthetic Peptide To Be Published.