Sodium in PDB 6uzm: Hla-B*15:02 Complexed with A Synthetic Peptide

The structure of Hla-B*15:02 Complexed with A Synthetic Peptide, PDB code: 6uzm was solved by R.J.Schutte, D.Li, D.A.Ostrov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.67 / 1.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.103, 81.484, 109.327, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 23.1

The binding sites of Sodium atom in the Hla-B*15:02 Complexed with A Synthetic Peptide (pdb code 6uzm). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Hla-B*15:02 Complexed with A Synthetic Peptide, PDB code: 6uzm:

Sodium binding site 1 out of 1 in the Hla-B*15:02 Complexed with A Synthetic Peptide


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Hla-B*15:02 Complexed with A Synthetic Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Na102 b:36.9 occ:0.73 O B:LEU87 2.3 36.4 1.0 O B:HOH278 2.4 39.5 1.0 O B:HIS84 2.6 32.1 1.0 OD1 B:ASN83 2.6 38.9 1.0 O B:HOH275 2.6 37.4 1.0 C B:LEU87 3.5 38.3 1.0 C B:HIS84 3.5 33.0 1.0 CG B:ASN83 3.5 37.5 1.0 ND2 B:ASN83 4.0 44.5 1.0 N B:HIS84 4.1 26.8 1.0 N B:LEU87 4.1 35.1 1.0 CA B:LEU87 4.1 36.0 1.0 CB B:LEU87 4.2 33.7 1.0 CA B:VAL85 4.2 34.1 1.0 O B:SER88 4.3 46.5 1.0 N B:VAL85 4.3 31.6 1.0 O B:HOH268 4.4 47.2 1.0 C B:VAL85 4.4 36.4 1.0 O B:VAL85 4.5 33.8 1.0 CA B:HIS84 4.5 30.2 1.0 C B:SER88 4.5 44.8 1.0 N B:SER88 4.5 43.6 1.0 CA B:SER88 4.8 43.6 1.0 CB B:ASN83 4.8 34.6 1.0 C B:ASN83 5.0 28.8 1.0

R.J.Schutte, D.Li, D.A.Ostrov. Hla-B*15:02 Complexed with A Synthetic Peptide To Be Published.